RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 BAALCQ8WXS3 180 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 DUSP14O95147 198 aaKnown RBP10.18□□□□□ -0.78
HDAC4-214ENST00000535493 RNASE4P34096 147 aaKnown RBP10.18□□□□□ -0.78
HDAC4-214ENST00000535493 SAA4P35542 130 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 PHLDA3Q9Y5J5 127 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 MUC4Q99102 2169 aa10.18□□□□□ -0.78
HDAC4-214ENST00000535493 FAM110DQ8TAY7 271 aaPredicted RBP10.17□□□□□ -0.78
HDAC4-214ENST00000535493 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
HDAC4-214ENST00000535493 J3QR89 54 aa10.17□□□□□ -0.78
HDAC4-214ENST00000535493 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
HDAC4-214ENST00000535493 SYT8Q8NBV8 401 aa10.17□□□□□ -0.78
HDAC4-214ENST00000535493 IGHV3-11P01762 117 aa10.16□□□□□ -0.78
HDAC4-214ENST00000535493 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
HDAC4-214ENST00000535493 A0A1W2PPR1 153 aa10.16□□□□□ -0.78
HDAC4-214ENST00000535493 RAB9AP51151 201 aa10.16□□□□□ -0.78
HDAC4-214ENST00000535493 FHL3Q13643 280 aa10.16□□□□□ -0.78
HDAC4-214ENST00000535493 TOMM6Q96B49 74 aa10.16□□□□□ -0.78
HDAC4-214ENST00000535493 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 Q6ZS46 218 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 AJUBAQ96IF1 538 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 RNF223E7ERA6 249 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 EBI3Q14213 229 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 TAL2Q16559 108 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 ATP6V0BQ99437 205 aa10.15□□□□□ -0.78
HDAC4-214ENST00000535493 CENPEQ02224 2701 aa10.15□□□□□ -0.79
HDAC4-214ENST00000535493 ZANQ9Y493 2812 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 A0A087WWL8 130 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 ZFAND2AQ8N6M9 145 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 TSPAN13O95857 204 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
HDAC4-214ENST00000535493 CRYGDP07320 174 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 EDN2P20800 178 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 CKS1BP61024 79 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 FOXI1Q12951 378 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 GPHB5Q86YW7 130 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 UTP20O75691 2785 aaKnown RBP10.13□□□□□ -0.79
HDAC4-214ENST00000535493 TRAV12-1A0A0B4J245 112 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 PRSS47A8MTI9 375 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 MRAP2Q96G30 205 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 TSHBP01222 138 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 MT-ATP8P03928 68 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
HDAC4-214ENST00000535493 DPH3P1Q9H4G8 78 aa10.13□□□□□ -0.79
HDAC4-214ENST00000535493 IGHV3-64A0A075B6Q5 118 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 IGHV4-4A0A075B6R2 117 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 TSPEAR-AS2P59090 65 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 FOXC1Q12948 553 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 SIRPDQ9H106 197 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 UBTD1Q9HAC8 227 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 H7C2G1 150 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 ASIPP42127 132 aa10.12□□□□□ -0.79
HDAC4-214ENST00000535493 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 F5H697 171 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 FAM74A4Q5TZK3 123 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 KIR2DL4Q99706 377 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 MINOS1-NBL1R4GNA1 71 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 A0A1B0GV72 72 aa10.11□□□□□ -0.79
HDAC4-214ENST00000535493 RNASE3P12724 160 aaKnown RBP10.11□□□□□ -0.79
HDAC4-214ENST00000535493 DLX4Q92988 240 aaPredicted RBP10.11□□□□□ -0.79
HDAC4-214ENST00000535493 CENPVL3A0A0U1RRI6 287 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 COX6B1P14854 86 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 OR10J6PQ8NGY7 276 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 RAX2Q96IS3 184 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 TCL1BO95988 128 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 C11orf71Q6IPW1 123 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 C1QTNF4Q9BXJ3 329 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 ABCA2Q9BZC7 2435 aa10.1□□□□□ -0.79
HDAC4-214ENST00000535493 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 SPINK8P0C7L1 97 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 XGP55808 180 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 ADORA2A-AS1P86434 159 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 LY6EQ16553 131 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 ITLN2Q8WWU7 325 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-214ENST00000535493 USP9YO00507 2555 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-214ENST00000535493 IGLV4-69A0A075B6H9 119 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 TRBV7-1A0A0A6YYK4 115 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 CD7P09564 240 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 CARD19Q96LW7 228 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 ZNF256Q9Y2P7 627 aaPredicted RBP10.09□□□□□ -0.79
HDAC4-214ENST00000535493 U3KQE9 123 aa10.09□□□□□ -0.79
HDAC4-214ENST00000535493 UBE2D1P51668 147 aa10.08□□□□□ -0.8
HDAC4-214ENST00000535493 TCF15Q12870 199 aa10.08□□□□□ -0.8
HDAC4-214ENST00000535493 BPESC1Q9GZL8 116 aa10.08□□□□□ -0.8
HDAC4-214ENST00000535493 A0A0J9YY99 117 aa10.08□□□□□ -0.8
HDAC4-214ENST00000535493 SCGB1C2P0DMR2 95 aa10.08□□□□□ -0.8
HDAC4-214ENST00000535493 UBE2E1P51965 193 aa10.08□□□□□ -0.8
HDAC4-214ENST00000535493 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms