RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 A0A087WW49 117 aa14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 SIVA1O15304 175 aa14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
SFSWAP-203ENST00000535236 I3L2K1 104 aa14.15□□□□□ -0.15
SFSWAP-203ENST00000535236 MRPL36Q9P0J6 103 aaKnown RBP14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 IGLV11-55A0A075B6I3 123 aa14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 CFC1BP0CG36 223 aa14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 CFC1P0CG37 223 aa14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 ADORA2A-AS1P86434 159 aa14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 AMTNQ6UX39 209 aa14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 TIMM17AQ99595 171 aa14.14□□□□□ -0.15
SFSWAP-203ENST00000535236 BAALC-AS2P0C853 105 aa14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 C16orf54Q6UWD8 224 aa14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 ANKRD29Q8N6D5 301 aa14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 RSPO3Q9BXY4 272 aaPredicted RBP14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 TRACP01848 142 aa14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 GATA1P15976 413 aaPredicted RBP14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 C12orf74Q32Q52 190 aa14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 RPL39LQ96EH5 51 aaKnown RBP14.13□□□□□ -0.15
SFSWAP-203ENST00000535236 PRSS47A8MTI9 375 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 K7EIM0 57 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 IFITM1P13164 125 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 C5orf56Q8N8D9 126 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 C15orf53Q8NAA6 179 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 NBASA2RRP1 2371 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 NDUFS6O75380 124 aaKnown RBP14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 HIST2H2BCQ6DN03 193 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 Q8NFD4 153 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 H3BMG7 143 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 MYCNOSP40205 109 aa14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 KLK5Q9Y337 293 aaPredicted RBP14.12□□□□□ -0.15
SFSWAP-203ENST00000535236 CTSGP08311 255 aa14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 CRYBA4P53673 196 aa14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 RITA1Q96K30 269 aa14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 ZNF747Q9BV97 191 aa14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 K7EP13 123 aa14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 DAZAP2Q15038 168 aaPredicted RBP14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 NTN5Q8WTR8 489 aaPredicted RBP14.11□□□□□ -0.15
SFSWAP-203ENST00000535236 PLXNA4Q9HCM2 1894 aa14.1□□□□□ -0.15
SFSWAP-203ENST00000535236 C2orf70A6NJV1 201 aa14.1□□□□□ -0.15
SFSWAP-203ENST00000535236 UBE2AP49459 152 aa14.1□□□□□ -0.15
SFSWAP-203ENST00000535236 Q8N9W7 124 aa14.1□□□□□ -0.15
SFSWAP-203ENST00000535236 TM2D2Q9BX73 214 aa14.1□□□□□ -0.15
SFSWAP-203ENST00000535236 NOTCH3Q9UM47 2321 aa14.09□□□□□ -0.15
SFSWAP-203ENST00000535236 HHLA3Q9XRX5 114 aa14.09□□□□□ -0.15
SFSWAP-203ENST00000535236 COX7B2Q8TF08 81 aa14.09□□□□□ -0.15
SFSWAP-203ENST00000535236 NDUFB1O75438 58 aa14.09□□□□□ -0.15
SFSWAP-203ENST00000535236 IGHV4-28A0A0C4DH34 117 aa14.09□□□□□ -0.15
SFSWAP-203ENST00000535236 SND1-IT1Q9HBX3 110 aa14.09□□□□□ -0.15
SFSWAP-203ENST00000535236 RS1O15537 224 aa14.08□□□□□ -0.15
SFSWAP-203ENST00000535236 SMAD5-AS1Q9Y6J3 95 aa14.08□□□□□ -0.15
SFSWAP-203ENST00000535236 NDUFA1O15239 70 aa14.08□□□□□ -0.16
SFSWAP-203ENST00000535236 DEFB135Q30KP9 77 aa14.08□□□□□ -0.16
SFSWAP-203ENST00000535236 ZFP2Q6ZN57 461 aa14.08□□□□□ -0.16
SFSWAP-203ENST00000535236 CLPSL1A2RUU4 121 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 C4orf48Q5BLP8 95 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 C10orf91Q5T1B1 145 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 MGAMO43451 1857 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 IGKV1-17P01599 117 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 C4orf3Q8WVX3 66 aa14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 FGF23Q9GZV9 251 aaPredicted RBP14.07□□□□□ -0.16
SFSWAP-203ENST00000535236 K7EMT4 169 aa14.06□□□□□ -0.16
SFSWAP-203ENST00000535236 A0A0J9YXV3 536 aa14.06□□□□□ -0.16
SFSWAP-203ENST00000535236 Q8N1Y9 231 aa14.06□□□□□ -0.16
SFSWAP-203ENST00000535236 CHKB-CPT1BH3BT56 60 aa14.05□□□□□ -0.16
SFSWAP-203ENST00000535236 DEFB4AO15263 64 aa14.05□□□□□ -0.16
SFSWAP-203ENST00000535236 H0YGX0 51 aa14.05□□□□□ -0.16
SFSWAP-203ENST00000535236 OPRPNQ99935 248 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-203ENST00000535236 MAJINQ3KP22 176 aa14.05□□□□□ -0.16
SFSWAP-203ENST00000535236 TRBV7-3A0A075B6L6 115 aa14.04□□□□□ -0.16
SFSWAP-203ENST00000535236 LINC01545Q5VT33 79 aa14.04□□□□□ -0.16
SFSWAP-203ENST00000535236 FANCD2OSQ96PS1 177 aa14.04□□□□□ -0.16
SFSWAP-203ENST00000535236 TMEM89A2RUT3 159 aa14.04□□□□□ -0.16
SFSWAP-203ENST00000535236 ZFP36P26651 326 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-203ENST00000535236 PCP2Q8IVA1 136 aa14.04□□□□□ -0.16
SFSWAP-203ENST00000535236 IGLL5B9A064 214 aa14.03□□□□□ -0.16
SFSWAP-203ENST00000535236 DOCK11Q5JSL3 2073 aa14.03□□□□□ -0.16
SFSWAP-203ENST00000535236 KRTAP27-1Q3LI81 207 aa14.03□□□□□ -0.16
SFSWAP-203ENST00000535236 C9orf47Q6ZRZ4 202 aa14.03□□□□□ -0.16
SFSWAP-203ENST00000535236 GPHB5Q86YW7 130 aa14.03□□□□□ -0.16
SFSWAP-203ENST00000535236 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.02□□□□□ -0.163e-7■■■■□ 19.8
SFSWAP-203ENST00000535236 NCR3O14931 201 aa14.02□□□□□ -0.16
SFSWAP-203ENST00000535236 RBM3P98179 157 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-203ENST00000535236 IL15RAQ13261 267 aa14.02□□□□□ -0.16
SFSWAP-203ENST00000535236 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.16
SFSWAP-203ENST00000535236 VSIG2Q96IQ7 327 aa14.02□□□□□ -0.16
SFSWAP-203ENST00000535236 WI2-2373I1.2A0A1W2PRP0 233 aa14.02□□□□□ -0.17
SFSWAP-203ENST00000535236 GAGE12HA6NDE8 117 aa14.02□□□□□ -0.17
SFSWAP-203ENST00000535236 PATE2Q6UY27 113 aa14.02□□□□□ -0.17
SFSWAP-203ENST00000535236 MUSTN1Q8IVN3 82 aa14.01□□□□□ -0.17
SFSWAP-203ENST00000535236 HELZP42694 1942 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-203ENST00000535236 DOCK9Q9BZ29 2069 aa14.01□□□□□ -0.17
SFSWAP-203ENST00000535236 TMEM258P61165 79 aa14.01□□□□□ -0.17
SFSWAP-203ENST00000535236 RLFQ13129 1914 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 Q8N7P7 452 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 PRAC2D3DTV9 90 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 INSL3P51460 131 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 MALRD1Q5VYJ5 2156 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 PLXNA2O75051 1894 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms