RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 TTTY13Q9BZ97 58 aa3.85□□□□□ -1.79
SNHG1-201ENST00000535076 LINC00474Q9P2X8 69 aa3.85□□□□□ -1.79
SNHG1-201ENST00000535076 EML6Q6ZMW3 1958 aa3.85□□□□□ -1.79
SNHG1-201ENST00000535076 COL4A2P08572 1712 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 TRAV40A0A0B4J280 105 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 A0A0J9YX75 114 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 TMEM30CPA0ZSE6 113 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 M0R135 149 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 CCL24O00175 119 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 COX7A2P2O60397 106 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 SH2D1AO60880 128 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 IGLV3-1P01715 115 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 IGHV4-34P06331 123 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 PIRTP0C851 137 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 EGR2P11161 476 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-201ENST00000535076 EDDM3BP56851 147 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 C20orf197Q8N268 126 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 ZNF524Q96C55 264 aa3.84□□□□□ -1.79
SNHG1-201ENST00000535076 BBC3Q96PG8 261 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-201ENST00000535076 LTBP1Q14766 1721 aa3.84□□□□□ -1.8
SNHG1-201ENST00000535076 TRAV8-3A0A0A6YYJ7 113 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 KLLNB2CW77 178 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 F6UB75 175 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 WNT9BO14905 357 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 FSTL3O95633 263 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1-39P01597 117 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1D-39P04432 117 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 CD70P32970 193 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 OVOL2Q9BRP0 275 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 PROK2Q9HC23 129 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 GOLGA4Q13439 2230 aaKnown RBP3.83□□□□□ -1.8
SNHG1-201ENST00000535076 POLEQ07864 2286 aa3.83□□□□□ -1.8
SNHG1-201ENST00000535076 C2orf16Q68DN1 1984 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 TANC2Q9HCD6 1990 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 COL5A1P20908 1838 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-201ENST00000535076 IGHV3OR16-10A0A075B7F0 116 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 IGHV3OR16-9A0A0B4J2B5 98 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1-9A0A0C4DH69 117 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 CXorf51AA0A1B0GTR3 108 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 SDHAF1A6NFY7 115 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 H0Y9J4 135 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 M0R381 172 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 UBE2AP49459 152 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 BLCAPP62952 87 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 PIK3CD-AS1Q5SR53 167 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 FAM216BQ8N7L0 139 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 CCL28Q9NRJ3 127 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 SPRR3Q9UBC9 169 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 ICOSQ9Y6W8 199 aa3.82□□□□□ -1.8
SNHG1-201ENST00000535076 LTBP2Q14767 1821 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1D-42A0A075B6H8 117 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1D-17A0A075B6S4 117 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 IGHV1OR21-1A0A087WYE8 117 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 IGHV1OR15-9A0A0B4J2B8 117 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 D6R8Y8 96 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 TRIAP1O43715 76 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 CD28P10747 220 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 MIFP14174 115 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 MP68P56378 58 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 FOXL2NBQ6ZUU3 175 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 ZNF491Q8N8L2 437 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 SPACA5Q96QH8 159 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 FAM30AQ9NZY2 134 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 TIMM8BQ9Y5J9 83 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-201ENST00000535076 SMAD5-AS1Q9Y6J3 95 aa3.81□□□□□ -1.8
SNHG1-201ENST00000535076 DOCK7Q96N67 2140 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1D-13A0A0B4J2D9 117 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 TRGV8A0A0C4DH27 118 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 A6NN06 94 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 C4orf51C9J302 202 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 F8WEM9 126 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 H3BSH0 61 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 COX7A2LO14548 114 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 IGHV4-39P01824 125 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 PRSS2P07478 247 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 LINC00271P0C7V0 271 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1-13P0DP09 117 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 FOLR3P41439 243 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 ZNF137PP52743 207 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 KRTAP1-1Q07627 177 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 CIRBPQ14011 172 aaKnown RBP3.8□□□□□ -1.8
SNHG1-201ENST00000535076 Q8IYB0 196 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 COL4A6Q14031 1691 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 TET1Q8NFU7 2136 aa3.8□□□□□ -1.8
SNHG1-201ENST00000535076 FREM3P0C091 2139 aa3.79□□□□□ -1.8
SNHG1-201ENST00000535076 IGKV1D-43A0A0B4J1Z2 117 aa3.79□□□□□ -1.8
SNHG1-201ENST00000535076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-201ENST00000535076 E7EUB6 86 aa3.79□□□□□ -1.8
SNHG1-201ENST00000535076 C19orf84I3L1E1 186 aa3.79□□□□□ -1.8
SNHG1-201ENST00000535076 IGHV3-13P01766 116 aa3.79□□□□□ -1.8
SNHG1-201ENST00000535076 FUSP35637 526 aaKnown RBP eCLIP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms