RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 INO80EQ8NBZ0 244 aaPredicted RBP12.42□□□□□ -0.42
CTSB-233ENST00000534636 NTN5Q8WTR8 489 aaPredicted RBP12.42□□□□□ -0.42
CTSB-233ENST00000534636 SH3BGRL3Q9H299 93 aa12.42□□□□□ -0.42
CTSB-233ENST00000534636 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
CTSB-233ENST00000534636 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
CTSB-233ENST00000534636 PTTG1O95997 202 aa12.41□□□□□ -0.42
CTSB-233ENST00000534636 IGLV2-11P01706 119 aa12.41□□□□□ -0.42
CTSB-233ENST00000534636 DPPA3Q6W0C5 159 aa12.41□□□□□ -0.42
CTSB-233ENST00000534636 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
CTSB-233ENST00000534636 PTH2Q96A98 100 aa12.41□□□□□ -0.42
CTSB-233ENST00000534636 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
CTSB-233ENST00000534636 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 A0A1W2PRE2 83 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 PGPEP1LA6NFU8 196 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 IFNA7P01567 189 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 IGHV3-30P01768 117 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 IGHV3-33P01772 117 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 IGHV3-30-3P0DP02 117 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 IGHV3-30-5P0DP03 117 aa12.4□□□□□ -0.42
CTSB-233ENST00000534636 A8MWV9 139 aa12.39□□□□□ -0.43
CTSB-233ENST00000534636 RNASE3P12724 160 aaKnown RBP12.39□□□□□ -0.43
CTSB-233ENST00000534636 ASIPP42127 132 aa12.39□□□□□ -0.43
CTSB-233ENST00000534636 GIPP09681 153 aaPredicted RBP12.38□□□□□ -0.43
CTSB-233ENST00000534636 LAGE3Q14657 143 aa12.38□□□□□ -0.43
CTSB-233ENST00000534636 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
CTSB-233ENST00000534636 ZFP2Q6ZN57 461 aa12.38□□□□□ -0.43
CTSB-233ENST00000534636 ARL2-SNX15V9GYD0 113 aa12.38□□□□□ -0.43
CTSB-233ENST00000534636 LRCOL1A6NCL2 159 aa12.37□□□□□ -0.43
CTSB-233ENST00000534636 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
CTSB-233ENST00000534636 Q8N814 137 aa12.37□□□□□ -0.43
CTSB-233ENST00000534636 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
CTSB-233ENST00000534636 PARLQ9H300 379 aa12.37□□□□□ -0.43
CTSB-233ENST00000534636 BATF3Q9NR55 127 aa12.37□□□□□ -0.43
CTSB-233ENST00000534636 FXYD6-FXYD2A0A087WZ82 144 aa12.36□□□□□ -0.43
CTSB-233ENST00000534636 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
CTSB-233ENST00000534636 CTXND1A0A1B0GTU2 59 aa12.36□□□□□ -0.43
CTSB-233ENST00000534636 FABP5P3A8MUU1 101 aa12.36□□□□□ -0.43
CTSB-233ENST00000534636 UBE2G2P60604 165 aa12.36□□□□□ -0.43
CTSB-233ENST00000534636 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
CTSB-233ENST00000534636 TMEM70Q9BUB7 260 aa12.36□□□□□ -0.43
CTSB-233ENST00000534636 NKX6-2Q9C056 277 aaPredicted RBP12.36□□□□□ -0.43
CTSB-233ENST00000534636 GAGE12JA6NER3 117 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 PEX7O00628 323 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 GAGE1Q13065 139 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 GAGE4Q13068 117 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 GAGE5Q13069 117 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 GAGE13Q4V321 117 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 AKR1C8PQ5T2L2 129 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 Q86TA4 180 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 SYT8Q8NBV8 401 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 LINC00479Q96M42 142 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 HERC1Q15751 4861 aa12.35□□□□□ -0.43
CTSB-233ENST00000534636 VPS13BQ7Z7G8 4022 aa12.34□□□□□ -0.43
CTSB-233ENST00000534636 IGKV3D-20A0A0C4DH25 116 aa12.34□□□□□ -0.43
CTSB-233ENST00000534636 B4DEV8 164 aa12.34□□□□□ -0.43
CTSB-233ENST00000534636 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
CTSB-233ENST00000534636 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
CTSB-233ENST00000534636 TOR2AQ5JU69 321 aa12.34□□□□□ -0.43
CTSB-233ENST00000534636 HIST1H2BAQ96A08 127 aa12.34□□□□□ -0.43
CTSB-233ENST00000534636 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
CTSB-233ENST00000534636 SRRM2Q9UQ35 2752 aaKnown RBP12.34□□□□□ -0.43
CTSB-233ENST00000534636 TRAV8-3A0A0A6YYJ7 113 aa12.33□□□□□ -0.44
CTSB-233ENST00000534636 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
CTSB-233ENST00000534636 H3BVH4 76 aa12.33□□□□□ -0.44
CTSB-233ENST00000534636 RHODO00212 210 aa12.33□□□□□ -0.44
CTSB-233ENST00000534636 Q5BKY6 102 aa12.33□□□□□ -0.44
CTSB-233ENST00000534636 A0A087WWC5 75 aa12.32□□□□□ -0.44
CTSB-233ENST00000534636 UBE2G1P62253 170 aa12.32□□□□□ -0.44
CTSB-233ENST00000534636 ZNF726P1Q15940 193 aa12.32□□□□□ -0.44
CTSB-233ENST00000534636 OR2T35Q8NGX2 323 aa12.32□□□□□ -0.44
CTSB-233ENST00000534636 URGCP-MRPS24S4R325 110 aa12.32□□□□□ -0.44
CTSB-233ENST00000534636 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
CTSB-233ENST00000534636 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
CTSB-233ENST00000534636 HAMPP81172 84 aa12.31□□□□□ -0.44
CTSB-233ENST00000534636 Q6ZSN1 163 aa12.31□□□□□ -0.44
CTSB-233ENST00000534636 OR11H4Q8NGC9 324 aa12.31□□□□□ -0.44
CTSB-233ENST00000534636 MYCBP2O75592 4640 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 M0R036 132 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 FMC1Q96HJ9 113 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 ZFP30Q9Y2G7 519 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
CTSB-233ENST00000534636 MAP1LC3B2A6NCE7 125 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 ZC2HC1AQ96GY0 325 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 MAP1LC3BQ9GZQ8 125 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 JPT2Q9H910 190 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 COX11Q9Y6N1 276 aa12.29□□□□□ -0.44
CTSB-233ENST00000534636 KRBOX1C9JBD0 128 aa12.28□□□□□ -0.44
CTSB-233ENST00000534636 SH2D1AO60880 128 aa12.28□□□□□ -0.44
CTSB-233ENST00000534636 ARMS2P0C7Q2 107 aa12.28□□□□□ -0.44
CTSB-233ENST00000534636 TPT1P13693 172 aaKnown RBP12.28□□□□□ -0.44
CTSB-233ENST00000534636 Q8N3U1 123 aa12.28□□□□□ -0.44
CTSB-233ENST00000534636 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
CTSB-233ENST00000534636 STOML3Q8TAV4 291 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms