RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 PKHD1P08F94 4074 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 B4DEV8 164 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 SEC11BP0C7V7 166 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 Q86TA4 180 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 FAM213BQ8TBF2 198 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 PTH2Q96A98 100 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 TCEAL7Q9BRU2 100 aa12.95□□□□□ -0.34
LRRK1-210ENST00000534045 KIAA1109Q2LD37 5005 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 TRAV8-6A0A0B4J262 113 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 IGKV3D-20A0A0C4DH25 116 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 A8MWV9 139 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 PFDN1O60925 122 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 MGST1P10620 155 aaKnown RBP12.94□□□□□ -0.34
LRRK1-210ENST00000534045 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
LRRK1-210ENST00000534045 FHITP49789 147 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 WFDC10BQ8IUB3 73 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 HERC2O95714 4834 aa12.94□□□□□ -0.34
LRRK1-210ENST00000534045 M0R036 132 aa12.93□□□□□ -0.34
LRRK1-210ENST00000534045 AKR1C3P42330 323 aa12.93□□□□□ -0.34
LRRK1-210ENST00000534045 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
LRRK1-210ENST00000534045 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
LRRK1-210ENST00000534045 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
LRRK1-210ENST00000534045 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
LRRK1-210ENST00000534045 A0A1B0GV50 99 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 BCL2L11O43521 198 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 PAGE4O60829 102 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 CRYGDP07320 174 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 ERVFC1-1P60608 527 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 MSRB1Q9NZV6 116 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 TNFRSF18Q9Y5U5 241 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 DNAH11Q96DT5 4516 aa12.92□□□□□ -0.34
LRRK1-210ENST00000534045 DNAH10OSP0CZ25 163 aa12.91□□□□□ -0.34
LRRK1-210ENST00000534045 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
LRRK1-210ENST00000534045 OR11H4Q8NGC9 324 aa12.91□□□□□ -0.34
LRRK1-210ENST00000534045 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
LRRK1-210ENST00000534045 IL36BQ9NZH7 164 aa12.91□□□□□ -0.34
LRRK1-210ENST00000534045 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 GRIFINA4D1Z8 144 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 H3BVH4 76 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 SH2D1AO60880 128 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 S100A9P06702 114 aaKnown RBP12.9□□□□□ -0.34
LRRK1-210ENST00000534045 H2AFB1P0C5Y9 115 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 TIRAPP58753 221 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 ZFP2Q6ZN57 461 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 ATP6V0E2Q8NHE4 81 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 MBD3L1Q8WWY6 194 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
LRRK1-210ENST00000534045 DYNC1H1Q14204 4646 aaKnown RBP12.89□□□□□ -0.35
LRRK1-210ENST00000534045 KRBOX1C9JBD0 128 aa12.89□□□□□ -0.35
LRRK1-210ENST00000534045 ARMS2P0C7Q2 107 aa12.89□□□□□ -0.35
LRRK1-210ENST00000534045 TPT1P13693 172 aaKnown RBP12.89□□□□□ -0.35
LRRK1-210ENST00000534045 CRIP1P50238 77 aa12.89□□□□□ -0.35
LRRK1-210ENST00000534045 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
LRRK1-210ENST00000534045 TMSB15BA0A087X1C1 80 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 TRBV6-1A0A0K0K1D8 114 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 CDK2AP2O75956 126 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 LTAP01374 205 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
LRRK1-210ENST00000534045 TMUB2Q71RG4 321 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 GTSF1LQ9H1H1 148 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 PARLQ9H300 379 aa12.88□□□□□ -0.35
LRRK1-210ENST00000534045 PSCAO43653 123 aa12.87□□□□□ -0.35
LRRK1-210ENST00000534045 KRTAP10-2P60368 255 aa12.87□□□□□ -0.35
LRRK1-210ENST00000534045 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
LRRK1-210ENST00000534045 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
LRRK1-210ENST00000534045 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 RHODO00212 210 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 GAGE1Q13065 139 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 GAGE4Q13068 117 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 GAGE5Q13069 117 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 DNLZQ5SXM8 178 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 LELP1Q5T871 98 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 EIF5AL1Q6IS14 154 aaKnown RBP12.86□□□□□ -0.35
LRRK1-210ENST00000534045 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
LRRK1-210ENST00000534045 M0R381 172 aa12.85□□□□□ -0.35
LRRK1-210ENST00000534045 KRTAP17-1Q9BYP8 105 aa12.85□□□□□ -0.35
LRRK1-210ENST00000534045 JPT2Q9H910 190 aa12.85□□□□□ -0.35
LRRK1-210ENST00000534045 LINC01559Q495D7 138 aa12.84□□□□□ -0.35
LRRK1-210ENST00000534045 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
LRRK1-210ENST00000534045 Q6ZSN1 163 aa12.84□□□□□ -0.35
LRRK1-210ENST00000534045 SCO2A0A1W2PP80 73 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.36
LRRK1-210ENST00000534045 A0A087WTM6 91 aa12.82□□□□□ -0.36
LRRK1-210ENST00000534045 RAB5CP51148 216 aa12.82□□□□□ -0.36
LRRK1-210ENST00000534045 MAPKAPK5-AS1Q8N8E1 139 aa12.82□□□□□ -0.36
LRRK1-210ENST00000534045 GNG13Q9P2W3 67 aa12.82□□□□□ -0.36
LRRK1-210ENST00000534045 A0A087WWC5 75 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms