RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 S100A4P26447 101 aaKnown RBP7.13□□□□□ -1.27
CAPN1-225ENST00000533704 Q86TA4 180 aa7.13□□□□□ -1.27
CAPN1-225ENST00000533704 WFDC10BQ8IUB3 73 aa7.13□□□□□ -1.27
CAPN1-225ENST00000533704 MED9Q9NWA0 146 aa7.13□□□□□ -1.27
CAPN1-225ENST00000533704 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
CAPN1-225ENST00000533704 LY96Q9Y6Y9 160 aa7.13□□□□□ -1.27
CAPN1-225ENST00000533704 TRAV9-2A0A087WT02 112 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 A0A1B0GV50 99 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 PGPEP1LA6NFU8 196 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 RS1O15537 224 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
CAPN1-225ENST00000533704 ZNF506Q5JVG8 444 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 CFAP126Q5VTH2 177 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 DPPA3Q6W0C5 159 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 STOML3Q8TAV4 291 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
CAPN1-225ENST00000533704 FABP5P3A8MUU1 101 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 M0R036 132 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 SCO1O75880 301 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 RNASE3P12724 160 aaKnown RBP7.11□□□□□ -1.27
CAPN1-225ENST00000533704 BTF3P20290 206 aaKnown RBP7.11□□□□□ -1.27
CAPN1-225ENST00000533704 EVI2AP22794 236 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 ASIPP42127 132 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 FHITP49789 147 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 UBE2G1P62253 170 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 S100A12P80511 92 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 LGALSLQ3ZCW2 172 aaPredicted RBP7.11□□□□□ -1.27
CAPN1-225ENST00000533704 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 SLC25A29Q8N8R3 303 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 HIST1H2BAQ96A08 127 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 PRADC1Q9BSG0 188 aa7.11□□□□□ -1.27
CAPN1-225ENST00000533704 NKX6-2Q9C056 277 aaPredicted RBP7.11□□□□□ -1.27
CAPN1-225ENST00000533704 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 B4DEV8 164 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 H3BVH4 76 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 EREGO14944 169 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 KRTAP10-2P60368 255 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 RHOHQ15669 191 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 ZC2HC1AQ96GY0 325 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 ZNF471Q9BX82 626 aaPredicted RBP7.1□□□□□ -1.27
CAPN1-225ENST00000533704 MSRB1Q9NZV6 116 aa7.1□□□□□ -1.27
CAPN1-225ENST00000533704 TMSB15BA0A087X1C1 80 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 KANTRA0A1W2PQU2 76 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 GRIFINA4D1Z8 144 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 PAGE4O60829 102 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 SH2D1AO60880 128 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 CRYGDP07320 174 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 FUSP35637 526 aaKnown RBP eCLIP7.09□□□□□ -1.27
CAPN1-225ENST00000533704 AKR1C3P42330 323 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 ERVFC1-1P60608 527 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 ZNF345Q14585 488 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 OR10J3Q5JRS4 329 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 Q6ZRN7 208 aaPredicted RBP7.09□□□□□ -1.27
CAPN1-225ENST00000533704 NFE4Q86UQ8 179 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 OR11H4Q8NGC9 324 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 SFT2D1Q8WV19 159 aa7.09□□□□□ -1.27
CAPN1-225ENST00000533704 TRAV8-6A0A0B4J262 113 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 A0A0D9SG52 128 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 TRBV6-4A0A1B0GX49 114 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 BCL2L11O43521 198 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 CIDEAO60543 219 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 DMRTA1Q5VZB9 504 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 FMC1Q96HJ9 113 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 PARLQ9H300 379 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 ZFP30Q9Y2G7 519 aa7.08□□□□□ -1.28
CAPN1-225ENST00000533704 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 HMSDA8MTL9 139 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 A8MWV9 139 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 ARMS2P0C7Q2 107 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 SEC11BP0C7V7 166 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 MGST1P10620 155 aaKnown RBP7.07□□□□□ -1.28
CAPN1-225ENST00000533704 CRIP1P50238 77 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 GAGE1Q13065 139 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 GAGE4Q13068 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 GAGE5Q13069 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 FAM74A4Q5TZK3 123 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 Q6ZSN1 163 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 LINC00518Q8N0U6 118 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 PTH2Q96A98 100 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 JPT2Q9H910 190 aa7.07□□□□□ -1.28
CAPN1-225ENST00000533704 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 UMAD1C9J7I0 102 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 M0R381 172 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 CDK2AP2O75956 126 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 TIRAPP58753 221 aa7.06□□□□□ -1.28
CAPN1-225ENST00000533704 EIF5AP63241 154 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms