RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 TVP23CQ96ET8 276 aa6.9□□□□□ -1.3
CTNND1-235ENST00000533189 C9orf85Q96MD7 179 aa6.9□□□□□ -1.3
CTNND1-235ENST00000533189 NDFIP1Q9BT67 221 aa6.9□□□□□ -1.3
CTNND1-235ENST00000533189 A0A0D9SG52 128 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 A8MWV9 139 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 ASIPP42127 132 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 NHLH2Q02577 135 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 Q0VG73 95 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 ZFP2Q6ZN57 461 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 ARL6IP6Q8N6S5 226 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 OR2T35Q8NGX2 323 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 WDR61Q9GZS3 305 aaKnown RBP6.89□□□□□ -1.31
CTNND1-235ENST00000533189 PARLQ9H300 379 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 MBD2Q9UBB5 411 aa6.89□□□□□ -1.31
CTNND1-235ENST00000533189 TAAR5O14804 337 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 LGALSLQ3ZCW2 172 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-235ENST00000533189 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 ATRAIDQ6UW56 229 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 HSD17B11Q8NBQ5 300 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 SAMD10Q9BYL1 202 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
CTNND1-235ENST00000533189 CCDC160A6NGH7 325 aa6.87□□□□□ -1.31
CTNND1-235ENST00000533189 RNASE3P12724 160 aaKnown RBP6.87□□□□□ -1.31
CTNND1-235ENST00000533189 IL15RAQ13261 267 aa6.87□□□□□ -1.31
CTNND1-235ENST00000533189 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-235ENST00000533189 TMEM75Q8N9X5 138 aa6.87□□□□□ -1.31
CTNND1-235ENST00000533189 ZC2HC1AQ96GY0 325 aa6.87□□□□□ -1.31
CTNND1-235ENST00000533189 Q9UF83 564 aa6.87□□□□□ -1.31
CTNND1-235ENST00000533189 TRAV6A0A075B6T7 132 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 GCGP01275 180 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 CRPP02741 224 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
CTNND1-235ENST00000533189 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-235ENST00000533189 GNG5P63218 68 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 ZFP69Q49AA0 526 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 SGK494Q96LW2 274 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 LINC00479Q96M42 142 aa6.86□□□□□ -1.31
CTNND1-235ENST00000533189 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-235ENST00000533189 SERTM2A0A1B0GWG4 89 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 K7EQM0 130 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
CTNND1-235ENST00000533189 HLA-DQA1P01909 254 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 TCRBP04435 133 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 IL7P13232 177 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 PIK3CD-AS1Q5SR53 167 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 OR2G3Q8NGZ4 309 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 OR5AC2Q9NZP5 309 aa6.85□□□□□ -1.31
CTNND1-235ENST00000533189 RHODO00212 210 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 PRSS1P07477 247 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
CTNND1-235ENST00000533189 SMUG1Q53HV7 270 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 PQLC2Q6ZP29 291 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 OR10G7Q8NGN6 311 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 SDHCQ99643 169 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-235ENST00000533189 JPT2Q9H910 190 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 NUDT15Q9NV35 164 aa6.84□□□□□ -1.31
CTNND1-235ENST00000533189 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 PANO1I0J062 215 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 LYRM1O43325 122 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 ENHOQ6UWT2 76 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 SCGB1C1Q8TD33 95 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 PSG8Q9UQ74 426 aa6.83□□□□□ -1.32
CTNND1-235ENST00000533189 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
CTNND1-235ENST00000533189 H2AFB2P0C5Z0 115 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
CTNND1-235ENST00000533189 LRRC37A5PQ49AS3 106 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 FAM74A4Q5TZK3 123 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 UFSP1Q6NVU6 142 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 SDIM1Q6ZPB5 146 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 PRNTQ86SH4 94 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 C5orf17Q8NAS9 161 aa6.82□□□□□ -1.32
CTNND1-235ENST00000533189 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
CTNND1-235ENST00000533189 PLA2G10O15496 165 aa6.81□□□□□ -1.32
CTNND1-235ENST00000533189 TCRAP04437 139 aa6.81□□□□□ -1.32
CTNND1-235ENST00000533189 FLI1Q01543 452 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-235ENST00000533189 MIAQ16674 131 aa6.81□□□□□ -1.32
CTNND1-235ENST00000533189 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
CTNND1-235ENST00000533189 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 H3BVH4 76 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 HMGB3O15347 200 aaKnown RBP6.8□□□□□ -1.32
CTNND1-235ENST00000533189 PKIAP61925 76 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 MPV17L2Q567V2 206 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 SAPCD1Q5SSQ6 148 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 OR11H4Q8NGC9 324 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 RNF185Q96GF1 192 aa6.8□□□□□ -1.32
CTNND1-235ENST00000533189 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
CTNND1-235ENST00000533189 A0A087WWL8 130 aa6.79□□□□□ -1.32
CTNND1-235ENST00000533189 TRBV6-8A0A0A6YYG3 113 aa6.79□□□□□ -1.32
CTNND1-235ENST00000533189 TRBV10-1A0A0K0K1A3 114 aa6.79□□□□□ -1.32
CTNND1-235ENST00000533189 H0YIZ8 118 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms