RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PSG3Q16557 428 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 ESRGQ1W209 222 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 BAGE2Q86Y30 109 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 BLNKQ8WV28 456 aa11.98□□□□□ -0.49
PKP3-208ENST00000531857 HERC1Q15751 4861 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 TCRAP04437 139 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 TTC32Q5I0X7 151 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 TMEM263Q8WUH6 116 aaKnown RBP11.97□□□□□ -0.49
PKP3-208ENST00000531857 ZNF586Q9NXT0 402 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 IL36BQ9NZH7 164 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 ZFP30Q9Y2G7 519 aa11.97□□□□□ -0.49
PKP3-208ENST00000531857 A0A087X0K7 114 aa11.96□□□□□ -0.49
PKP3-208ENST00000531857 MRPS12O15235 138 aaKnown RBP11.96□□□□□ -0.49
PKP3-208ENST00000531857 BTF3P20290 206 aaKnown RBP11.96□□□□□ -0.49
PKP3-208ENST00000531857 CDKN1BP46527 198 aa11.96□□□□□ -0.49
PKP3-208ENST00000531857 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
PKP3-208ENST00000531857 UPK3BQ9BT76 320 aa11.96□□□□□ -0.49
PKP3-208ENST00000531857 URGCP-MRPS24S4R325 110 aa11.96□□□□□ -0.49
PKP3-208ENST00000531857 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
PKP3-208ENST00000531857 OR10J6PQ8NGY7 276 aa11.95□□□□□ -0.5
PKP3-208ENST00000531857 SLC50A1Q9BRV3 221 aa11.95□□□□□ -0.5
PKP3-208ENST00000531857 ZNF492Q9P255 531 aa11.95□□□□□ -0.5
PKP3-208ENST00000531857 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 GAGE12BA1L429 117 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 GAGE7O76087 117 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 CXCL1P09341 107 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 GAGE12FP0CL80 117 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 GAGE12GP0CL81 117 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 GAGE12IP0CL82 117 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 CT83Q5H943 113 aa11.94□□□□□ -0.5
PKP3-208ENST00000531857 IBA57Q5T440 356 aaKnown RBP11.94□□□□□ -0.5
PKP3-208ENST00000531857 MRPS16Q9Y3D3 137 aaKnown RBP11.94□□□□□ -0.5
PKP3-208ENST00000531857 A0A1W2PPQ1 181 aa11.93□□□□□ -0.5
PKP3-208ENST00000531857 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
PKP3-208ENST00000531857 LTAP01374 205 aa11.93□□□□□ -0.5
PKP3-208ENST00000531857 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
PKP3-208ENST00000531857 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
PKP3-208ENST00000531857 RASL11AQ6T310 242 aa11.93□□□□□ -0.5
PKP3-208ENST00000531857 MRPL53Q96EL3 112 aaKnown RBP11.93□□□□□ -0.5
PKP3-208ENST00000531857 FAM231BA6NCW3 169 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 K7EN84 100 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 GFI1BQ5VTD9 330 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
PKP3-208ENST00000531857 PRAC2D3DTV9 90 aa11.91□□□□□ -0.5
PKP3-208ENST00000531857 GATCO43716 136 aaKnown RBP11.91□□□□□ -0.5
PKP3-208ENST00000531857 MT-ND6P03923 174 aa11.91□□□□□ -0.5
PKP3-208ENST00000531857 MGST1P10620 155 aaKnown RBP11.91□□□□□ -0.5
PKP3-208ENST00000531857 LINC00315P59091 139 aa11.91□□□□□ -0.5
PKP3-208ENST00000531857 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
PKP3-208ENST00000531857 Q6ZRN7 208 aaPredicted RBP11.91□□□□□ -0.5
PKP3-208ENST00000531857 DAZAP1Q96EP5 407 aaKnown RBP11.91□□□□□ -0.5
PKP3-208ENST00000531857 C20orf144Q9BQM9 153 aa11.91□□□□□ -0.5
PKP3-208ENST00000531857 ZNF331Q9NQX6 463 aaPredicted RBP11.91□□□□□ -0.5
PKP3-208ENST00000531857 V9GYV3 84 aa11.91□□□□□ -0.5
PKP3-208ENST00000531857 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
PKP3-208ENST00000531857 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
PKP3-208ENST00000531857 H3BNG1 76 aa11.9□□□□□ -0.5
PKP3-208ENST00000531857 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
PKP3-208ENST00000531857 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 PGPEP1LA6NFU8 196 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 A8MWL6 223 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 DIRC3C9JPN6 131 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 H3BTX0 84 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 COX8CQ7Z4L0 72 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 VSIG2Q96IQ7 327 aa11.89□□□□□ -0.51
PKP3-208ENST00000531857 A0A096LPF7 62 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 J3KRW8 73 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 SLC17A3O00476 420 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 XGP55808 180 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 Q6ZTI0 123 aa11.88□□□□□ -0.51
PKP3-208ENST00000531857 TRAV12-3A0A0B4J271 114 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 TRGC2P03986 189 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 S100A8P05109 93 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 GNG5P63218 68 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 ATP5L2Q7Z4Y8 100 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 Q86TA4 180 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 TSKUQ8WUA8 353 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 GNB1LQ9BYB4 327 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 NAT8BQ9UHF3 227 aa11.87□□□□□ -0.51
PKP3-208ENST00000531857 P01737 135 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 CT45A10P0DMU9 189 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 NDFIP1Q9BT67 221 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 PSG8Q9UQ74 426 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
PKP3-208ENST00000531857 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
PKP3-208ENST00000531857 DAZ2Q13117 558 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms