RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 SLC25A29Q8N8R3 303 aa8.91□□□□□ -0.98
SF3B2-212ENST00000531589 C9orf85Q96MD7 179 aa8.91□□□□□ -0.98
SF3B2-212ENST00000531589 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
SF3B2-212ENST00000531589 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 A0A087WTM6 91 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 FABP5P3A8MUU1 101 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 S100A4P26447 101 aaKnown RBP8.9□□□□□ -0.98
SF3B2-212ENST00000531589 PIK3CD-AS1Q5SR53 167 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 TCTE3Q8IZS6 198 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 HIST1H2BAQ96A08 127 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 KRTAP4-5Q9BYR2 181 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
SF3B2-212ENST00000531589 HMSDA8MTL9 139 aa8.89□□□□□ -0.99
SF3B2-212ENST00000531589 A8MWV9 139 aa8.89□□□□□ -0.99
SF3B2-212ENST00000531589 RNASE3P12724 160 aaKnown RBP8.89□□□□□ -0.99
SF3B2-212ENST00000531589 OR10J3Q5JRS4 329 aa8.89□□□□□ -0.99
SF3B2-212ENST00000531589 ZNF506Q5JVG8 444 aa8.89□□□□□ -0.99
SF3B2-212ENST00000531589 TMUB2Q71RG4 321 aa8.89□□□□□ -0.99
SF3B2-212ENST00000531589 ARL2-SNX15V9GYD0 113 aa8.89□□□□□ -0.99
SF3B2-212ENST00000531589 HSPG2P98160 4391 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 IGHV3-73A0A0B4J1V6 119 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 PGPEP1LA6NFU8 196 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 PEX7O00628 323 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 BCL2L11O43521 198 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 PSCAO43653 123 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 PFDN1O60925 122 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 ASIPP42127 132 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 NKX2-5P52952 324 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-212ENST00000531589 UBE2G2P60604 165 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 ZNF726P1Q15940 193 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 LGALSLQ3ZCW2 172 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-212ENST00000531589 LINC01556Q5JQF7 62 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 DPPA3Q6W0C5 159 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 STOML3Q8TAV4 291 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
SF3B2-212ENST00000531589 ZNF471Q9BX82 626 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-212ENST00000531589 TRAV34A0A0B4J273 112 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 IGKV3D-20A0A0C4DH25 116 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 FAM74A7A6NL05 159 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 IBA57-AS1B1ANH7 110 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 C1QBP02746 253 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 ZNF345Q14585 488 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 LELP1Q5T871 98 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 TCEAL7Q9BRU2 100 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 GTSF1LQ9H1H1 148 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 ZFP30Q9Y2G7 519 aa8.87□□□□□ -0.99
SF3B2-212ENST00000531589 A0A0D9SG52 128 aa8.86□□□□□ -0.99
SF3B2-212ENST00000531589 MAP1LC3B2A6NCE7 125 aa8.86□□□□□ -0.99
SF3B2-212ENST00000531589 FGF8P55075 233 aaPredicted RBP8.86□□□□□ -0.99
SF3B2-212ENST00000531589 UBE2G1P62253 170 aa8.86□□□□□ -0.99
SF3B2-212ENST00000531589 SYT8Q8NBV8 401 aa8.86□□□□□ -0.99
SF3B2-212ENST00000531589 MAP1LC3BQ9GZQ8 125 aa8.86□□□□□ -0.99
SF3B2-212ENST00000531589 IL36BQ9NZH7 164 aa8.86□□□□□ -0.99
SF3B2-212ENST00000531589 B4DEV8 164 aa8.85□□□□□ -0.99
SF3B2-212ENST00000531589 Q86TA4 180 aa8.85□□□□□ -0.99
SF3B2-212ENST00000531589 FMC1Q96HJ9 113 aa8.85□□□□□ -0.99
SF3B2-212ENST00000531589 PARLQ9H300 379 aa8.85□□□□□ -0.99
SF3B2-212ENST00000531589 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 A0A1B0GV50 99 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 FHITP49789 147 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 DNLZQ5SXM8 178 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 COX8CQ7Z4L0 72 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 C9orf62Q8N4C0 152 aa8.84□□□□□ -0.99
SF3B2-212ENST00000531589 A0A087WWC5 75 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 EPM2AB3EWF7 344 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 RHODO00212 210 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 GCSHP23434 173 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 LAGE3Q14657 143 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 CST9LP1Q5W188 147 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 NTN5Q8WTR8 489 aaPredicted RBP8.83□□□□□ -1
SF3B2-212ENST00000531589 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 TM2D2Q9BX73 214 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 PHLDA3Q9Y5J5 127 aa8.83□□□□□ -1
SF3B2-212ENST00000531589 TRBV6-1A0A0K0K1D8 114 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 GAGE12JA6NER3 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 KRBOX1C9JBD0 128 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 H3BVH4 76 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 M0R036 132 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 SH2D1AO60880 128 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 IGHV3-30P01768 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 IGHV3-33P01772 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 TPT1P13693 172 aaKnown RBP8.82□□□□□ -1
SF3B2-212ENST00000531589 CRIP1P50238 77 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 GAGE1Q13065 139 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 GAGE4Q13068 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 GAGE5Q13069 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 GAGE13Q4V321 117 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 FAM213BQ8TBF2 198 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 Q9HAA7 133 aa8.82□□□□□ -1
SF3B2-212ENST00000531589 APOBP04114 4563 aaKnown RBP8.82□□□□□ -1
SF3B2-212ENST00000531589 UMAD1C9J7I0 102 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms