RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 HMGB3O15347 200 aaKnown RBP6.02□□□□□ -1.45
NEDD8-206ENST00000531430 SIX6O95475 246 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 IL7P13232 177 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 S100A4P26447 101 aaKnown RBP6.02□□□□□ -1.45
NEDD8-206ENST00000531430 HNRNPA3P51991 378 aaKnown RBP6.02□□□□□ -1.45
NEDD8-206ENST00000531430 KHDC3LQ587J8 217 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 ZNF506Q5JVG8 444 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 CYB561D1Q8N8Q1 229 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 TMEM75Q8N9X5 138 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 TMED6Q8WW62 240 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 DAZAP1Q96EP5 407 aaKnown RBP6.02□□□□□ -1.45
NEDD8-206ENST00000531430 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 Q9UF83 564 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 A0A087WWC5 75 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 A0A1W2PPV4 95 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 LYRM1O43325 122 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 GCGP01275 180 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 SEC11BP0C7V7 166 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 ZNF80P51504 273 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-206ENST00000531430 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-206ENST00000531430 SDHCQ99643 169 aaPredicted RBP6.01□□□□□ -1.45
NEDD8-206ENST00000531430 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 NUDT15Q9NV35 164 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 C11orf21Q9P2W6 132 aa6.01□□□□□ -1.45
NEDD8-206ENST00000531430 PLA2G10O15496 165 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 FGF8P55075 233 aaPredicted RBP6□□□□□ -1.45
NEDD8-206ENST00000531430 IL15RAQ13261 267 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 ELOBQ15370 118 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 C14orf177Q52M58 125 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 DMRTA1Q5VZB9 504 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 PRNTQ86SH4 94 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 NIT1Q86X76 327 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 PARLQ9H300 379 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 JPT2Q9H910 190 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 OR5AC2Q9NZP5 309 aa6□□□□□ -1.45
NEDD8-206ENST00000531430 A8MWV9 139 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 ZFP69Q49AA0 526 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 FAM74A4Q5TZK3 123 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 OR2G3Q8NGZ4 309 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 C9orf85Q96MD7 179 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 C1orf43Q9BWL3 253 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 PSG8Q9UQ74 426 aa5.99□□□□□ -1.45
NEDD8-206ENST00000531430 FAM240BA0A1B0GVZ2 78 aa5.98□□□□□ -1.45
NEDD8-206ENST00000531430 K7EQM0 130 aa5.98□□□□□ -1.45
NEDD8-206ENST00000531430 HLA-DQA1P01909 254 aa5.98□□□□□ -1.45
NEDD8-206ENST00000531430 CRPP02741 224 aa5.98□□□□□ -1.45
NEDD8-206ENST00000531430 RNASE3P12724 160 aaKnown RBP5.98□□□□□ -1.45
NEDD8-206ENST00000531430 ASIPP42127 132 aa5.98□□□□□ -1.45
NEDD8-206ENST00000531430 SMUG1Q53HV7 270 aa5.98□□□□□ -1.45
NEDD8-206ENST00000531430 Q0VG73 95 aa5.97□□□□□ -1.45
NEDD8-206ENST00000531430 ZFP2Q6ZN57 461 aa5.97□□□□□ -1.45
NEDD8-206ENST00000531430 C15orf54Q8N8G6 183 aa5.97□□□□□ -1.45
NEDD8-206ENST00000531430 PTH2Q96A98 100 aa5.97□□□□□ -1.45
NEDD8-206ENST00000531430 ZC2HC1AQ96GY0 325 aa5.97□□□□□ -1.45
NEDD8-206ENST00000531430 A0A087WWL8 130 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 A0A0D9SG52 128 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 USP17L23D6RBM5 183 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 H0YIZ8 118 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 ANGP03950 147 aaKnown RBP5.96□□□□□ -1.46
NEDD8-206ENST00000531430 RAB2AP61019 212 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 SUMO1P63165 101 aaKnown RBP5.96□□□□□ -1.46
NEDD8-206ENST00000531430 FLI1Q01543 452 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-206ENST00000531430 PQLC2Q6ZP29 291 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 OR10G9Q8NGN4 311 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 OR10G7Q8NGN6 311 aa5.96□□□□□ -1.46
NEDD8-206ENST00000531430 GRIFINA4D1Z8 144 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 H3BVH4 76 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 M0R036 132 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 TCRAP04437 139 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 PRSS1P07477 247 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 ENHOQ6UWT2 76 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 Q6ZRU5 148 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 ARL6IP6Q8N6S5 226 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 LINC00479Q96M42 142 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 HSPB11Q9Y547 144 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
NEDD8-206ENST00000531430 PKHD1L1Q86WI1 4243 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
NEDD8-206ENST00000531430 TRAV34A0A0B4J273 112 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 IGKV3D-20A0A0C4DH25 116 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 SERTM2A0A1B0GWG4 89 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 FABP5P3A8MUU1 101 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 B4DEV8 164 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 M0R381 172 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 ARMS2P0C7Q2 107 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 ARL14EPLP0DKL9 152 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 LINC00694P0DN24 101 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 RPL12P30050 165 aaKnown RBP5.94□□□□□ -1.46
NEDD8-206ENST00000531430 RPL36AP83881 106 aaKnown RBP5.94□□□□□ -1.46
NEDD8-206ENST00000531430 CYCSP99999 105 aaKnown RBP5.94□□□□□ -1.46
NEDD8-206ENST00000531430 SAPCD1Q5SSQ6 148 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 DGAT2L7PQ6IED9 249 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 MZT2BQ6NZ67 158 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 CLPSL2Q6UWE3 100 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 C5orf17Q8NAS9 161 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 OR11H4Q8NGC9 324 aa5.94□□□□□ -1.46
NEDD8-206ENST00000531430 RPL36ALQ969Q0 106 aaKnown RBP5.94□□□□□ -1.46
NEDD8-206ENST00000531430 CHCHD5Q9BSY4 110 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms