RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TMEM75Q8N9X5 138 aa15.15■□□□□ 0.02
TRAPPC4-210ENST00000531290 SCRT2Q9NQ03 307 aa15.15■□□□□ 0.02
TRAPPC4-210ENST00000531290 hCG_2014768A0A024R1R8 64 aa15.14■□□□□ 0.01
TRAPPC4-210ENST00000531290 FHITP49789 147 aa15.14■□□□□ 0.01
TRAPPC4-210ENST00000531290 AKAP14Q86UN6 197 aa15.14■□□□□ 0.01
TRAPPC4-210ENST00000531290 HIST1H2BAQ96A08 127 aa15.14■□□□□ 0.01
TRAPPC4-210ENST00000531290 FAM74A7A6NL05 159 aa15.13■□□□□ 0.01
TRAPPC4-210ENST00000531290 CST9LP1Q5W188 147 aa15.13■□□□□ 0.01
TRAPPC4-210ENST00000531290 NHLRC2Q8NBF2 726 aa15.13■□□□□ 0.01
TRAPPC4-210ENST00000531290 MSRB1Q9NZV6 116 aa15.13■□□□□ 0.01
TRAPPC4-210ENST00000531290 PEX7O00628 323 aa15.12■□□□□ 0.01
TRAPPC4-210ENST00000531290 C1QBP02746 253 aa15.12■□□□□ 0.01
TRAPPC4-210ENST00000531290 DNAH10OSP0CZ25 163 aa15.12■□□□□ 0.01
TRAPPC4-210ENST00000531290 ZNF876PQ49A33 203 aa15.12■□□□□ 0.01
TRAPPC4-210ENST00000531290 SMUG1Q53HV7 270 aa15.12■□□□□ 0.01
TRAPPC4-210ENST00000531290 LOC100131303A0A0U1RQF7 123 aa15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 GCGP01275 180 aa15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 H2AFB1P0C5Y9 115 aa15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 GATA1P15976 413 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 LGALSLQ3ZCW2 172 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 MBD3L1Q8WWY6 194 aa15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 TCEAL7Q9BRU2 100 aa15.11■□□□□ 0.01
TRAPPC4-210ENST00000531290 CRYGDP07320 174 aa15.1■□□□□ 0.01
TRAPPC4-210ENST00000531290 CDPF1Q6NVV7 123 aa15.1■□□□□ 0.01
TRAPPC4-210ENST00000531290 C10orf126Q8N4M7 172 aa15.1■□□□□ 0.01
TRAPPC4-210ENST00000531290 ARL2-SNX15V9GYD0 113 aa15.1■□□□□ 0.01
TRAPPC4-210ENST00000531290 A0A087WTM6 91 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 TRAV34A0A0B4J273 112 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 TEX46H3BTG2 121 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 CIDEAO60543 219 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 IGLV2-11P01706 119 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 PFN1P07737 140 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 FUSP35637 526 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 RAB5CP51148 216 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 ZNF80P51504 273 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 UBE2G1P62253 170 aa15.09■□□□□ 0.01
TRAPPC4-210ENST00000531290 A0A1B0GV50 99 aa15.08■□□□□ 0
TRAPPC4-210ENST00000531290 TIRAPP58753 221 aa15.08■□□□□ 0
TRAPPC4-210ENST00000531290 LINC00479Q96M42 142 aa15.08■□□□□ 0
TRAPPC4-210ENST00000531290 PRADC1Q9BSG0 188 aa15.08■□□□□ 0
TRAPPC4-210ENST00000531290 C11orf21Q9P2W6 132 aa15.08■□□□□ 0
TRAPPC4-210ENST00000531290 PAGE4O60829 102 aa15.07■□□□□ 0
TRAPPC4-210ENST00000531290 CFAP126Q5VTH2 177 aa15.07■□□□□ 0
TRAPPC4-210ENST00000531290 SLC25A29Q8N8R3 303 aa15.07■□□□□ 0
TRAPPC4-210ENST00000531290 FMC1Q96HJ9 113 aa15.07■□□□□ 0
TRAPPC4-210ENST00000531290 IGHV3-38A0A0C4DH36 116 aa15.06■□□□□ 0
TRAPPC4-210ENST00000531290 RS1O15537 224 aa15.06■□□□□ 0
TRAPPC4-210ENST00000531290 SLC51BQ86UW2 128 aa15.06■□□□□ 0
TRAPPC4-210ENST00000531290 ZFP30Q9Y2G7 519 aa15.06■□□□□ 0
TRAPPC4-210ENST00000531290 IGHV3-73A0A0B4J1V6 119 aa15.05■□□□□ -0
TRAPPC4-210ENST00000531290 TRAV8-6A0A0B4J262 113 aa15.05■□□□□ -0
TRAPPC4-210ENST00000531290 TRBV6-4A0A1B0GX49 114 aa15.05■□□□□ -0
TRAPPC4-210ENST00000531290 FABP5P3A8MUU1 101 aa15.05■□□□□ -0
TRAPPC4-210ENST00000531290 RHOHQ15669 191 aa15.05■□□□□ -0
TRAPPC4-210ENST00000531290 BOLA1Q9Y3E2 137 aa15.05■□□□□ -0
TRAPPC4-210ENST00000531290 AKR1C3P42330 323 aa15.04■□□□□ -0
TRAPPC4-210ENST00000531290 Q86TA4 180 aa15.04■□□□□ -0
TRAPPC4-210ENST00000531290 C9orf85Q96MD7 179 aa15.04■□□□□ -0
TRAPPC4-210ENST00000531290 S100A9P06702 114 aaKnown RBP15.03■□□□□ -0
TRAPPC4-210ENST00000531290 OR10J3Q5JRS4 329 aa15.03■□□□□ -0
TRAPPC4-210ENST00000531290 PTH2Q96A98 100 aa15.03■□□□□ -0
TRAPPC4-210ENST00000531290 PGPEP1LA6NFU8 196 aa15.02■□□□□ -0
TRAPPC4-210ENST00000531290 PSCAO43653 123 aa15.02■□□□□ -0
TRAPPC4-210ENST00000531290 LINC01556Q5JQF7 62 aa15.02■□□□□ -0
TRAPPC4-210ENST00000531290 ZNF506Q5JVG8 444 aa15.02■□□□□ -0
TRAPPC4-210ENST00000531290 EPM2AB3EWF7 344 aa15.01□□□□□ -0.01
TRAPPC4-210ENST00000531290 MGST1P10620 155 aaKnown RBP15.01□□□□□ -0.01
TRAPPC4-210ENST00000531290 S100A4P26447 101 aaKnown RBP15.01□□□□□ -0.01
TRAPPC4-210ENST00000531290 SULT1A2P50226 295 aa15.01□□□□□ -0.01
TRAPPC4-210ENST00000531290 MANBALQ9NQG1 85 aa15.01□□□□□ -0.01
TRAPPC4-210ENST00000531290 TRAV1-1A0A0B4J248 108 aa15□□□□□ -0.01
TRAPPC4-210ENST00000531290 TRBV6-1A0A0K0K1D8 114 aa15□□□□□ -0.01
TRAPPC4-210ENST00000531290 RNASE3P12724 160 aaKnown RBP15□□□□□ -0.01
TRAPPC4-210ENST00000531290 GNG13Q9P2W3 67 aa15□□□□□ -0.01
TRAPPC4-210ENST00000531290 IBA57-AS1B1ANH7 110 aa14.99□□□□□ -0.01
TRAPPC4-210ENST00000531290 LELP1Q5T871 98 aa14.99□□□□□ -0.01
TRAPPC4-210ENST00000531290 ATP6V0E2Q8NHE4 81 aa14.99□□□□□ -0.01
TRAPPC4-210ENST00000531290 GCSHP23434 173 aa14.98□□□□□ -0.01
TRAPPC4-210ENST00000531290 XGP55808 180 aa14.98□□□□□ -0.01
TRAPPC4-210ENST00000531290 KRTAP10-1P60331 282 aa14.98□□□□□ -0.01
TRAPPC4-210ENST00000531290 FAM162BQ5T6X4 162 aa14.98□□□□□ -0.01
TRAPPC4-210ENST00000531290 C9orf62Q8N4C0 152 aa14.98□□□□□ -0.01
TRAPPC4-210ENST00000531290 GTSF1LQ9H1H1 148 aa14.98□□□□□ -0.01
TRAPPC4-210ENST00000531290 IGKV3D-20A0A0C4DH25 116 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 A8MWV9 139 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 LTAP01374 205 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 IFNA1P01562 189 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 ASIPP42127 132 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 ZC2HC1AQ96GY0 325 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 Q9HAA7 133 aa14.97□□□□□ -0.01
TRAPPC4-210ENST00000531290 SCO2A0A1W2PP80 73 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 B4DEV8 164 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 IGHV3-30P01768 117 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 IGHV3-33P01772 117 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 IGHV3-30-3P0DP02 117 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 IGHV3-30-5P0DP03 117 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 ZFP2Q6ZN57 461 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 COX8CQ7Z4L0 72 aa14.96□□□□□ -0.01
TRAPPC4-210ENST00000531290 CCL20P78556 96 aa14.95□□□□□ -0.02
TRAPPC4-210ENST00000531290 PIK3CD-AS1Q5SR53 167 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms