RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NIT1Q86X76 327 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 UBE2WQ96B02 151 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 SMIM8Q96KF7 97 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 C2orf50Q96LR7 162 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 GPN1Q9HCN4 374 aaPredicted RBP5.18□□□□□ -1.58
CD44-232ENST00000531118 MGAT4CQ9UBM8 478 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 KLK12Q9UKR0 248 aa5.18□□□□□ -1.58
CD44-232ENST00000531118 IGHV3-73A0A0B4J1V6 119 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 TRBV7-9A0A0J9YWB2 115 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 FNDC10F2Z333 226 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 GOSR2O14653 212 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 TSC22D2O75157 780 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 UPK1BO75841 260 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 PRSS1P07477 247 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 DEFA1P59665 94 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 DEFA3P59666 94 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 RPL19P84098 196 aaKnown RBP5.17□□□□□ -1.58
CD44-232ENST00000531118 RAB31Q13636 194 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 PDE6HQ13956 83 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 ZNF266Q14584 549 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 Q6AWC8 147 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 REG3GQ6UW15 175 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 EXOC3-AS1Q8N2X6 119 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 C12orf45Q8N5I9 185 aaPredicted RBP5.17□□□□□ -1.58
CD44-232ENST00000531118 ENKURQ8TC29 256 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 SH3BGRL3Q9H299 93 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 NAGKQ9UJ70 344 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 URGCP-MRPS24S4R325 110 aa5.17□□□□□ -1.58
CD44-232ENST00000531118 A0A087WYN8 130 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 HLA-DQA1P01909 254 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 BCAP31P51572 246 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 ZNF138P52744 262 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 CFAP126Q5VTH2 177 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 FAM159AQ6UWV7 190 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 SDIM1Q6ZPB5 146 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 C7orf33Q8WU49 177 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 MGST2Q99735 147 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 NPVFQ9HCQ7 196 aa5.16□□□□□ -1.58
CD44-232ENST00000531118 GAGE12JA6NER3 117 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 MBPP02686 304 aaPredicted RBP5.15□□□□□ -1.59
CD44-232ENST00000531118 TYMSP04818 313 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 METTL15P1P0C7V9 234 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 PYYP10082 97 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 HBG1P69891 147 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 HBG2P69892 147 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 GAGE1Q13065 139 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 GAGE4Q13068 117 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 GAGE5Q13069 117 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 DGAT2L7PQ6IED9 249 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 TMEM14EPQ6UXP3 125 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 DPPA3Q6W0C5 159 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 OR10G9Q8NGN4 311 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 RNF185Q96GF1 192 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 SEC22CQ9BRL7 303 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 CHCHD7Q9BUK0 85 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 GGACTQ9BVM4 153 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 AAMDCQ9H7C9 122 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 C11orf21Q9P2W6 132 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 LSM5Q9Y4Y9 91 aaKnown RBP5.15□□□□□ -1.59
CD44-232ENST00000531118 TIMM9Q9Y5J7 89 aa5.15□□□□□ -1.59
CD44-232ENST00000531118 A0A087WWC5 75 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 C7orf66A4D0T2 115 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 CCSO14618 274 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 CIDEAO60543 219 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 MGST1P10620 155 aaKnown RBP5.14□□□□□ -1.59
CD44-232ENST00000531118 CAV2P51636 162 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 S100A10P60903 97 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 CYCSP99999 105 aaKnown RBP5.14□□□□□ -1.59
CD44-232ENST00000531118 Q0VG73 95 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 STX12Q86Y82 276 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 CYB561D1Q8N8Q1 229 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 TMEM14CQ9P0S9 112 aa5.14□□□□□ -1.59
CD44-232ENST00000531118 INMT-MINDY4F8WBC2 141 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 GNRH2O43555 120 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 CRPP02741 224 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 S100A11P31949 105 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 ELOBQ15370 118 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 MIC13Q5XKP0 118 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 SPINK6Q6UWN8 80 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 Q6ZRG5 221 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 OR1L4Q8NGR5 311 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 PFDN5Q99471 154 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 ATP5SQ99766 215 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
CD44-232ENST00000531118 A0A087WX48 190 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 PET100P0DJ07 73 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 CAMLGP49069 296 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 SULT1A1P50225 295 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 CNBPP62633 177 aaKnown RBP5.12□□□□□ -1.59
CD44-232ENST00000531118 ARL16Q0P5N6 197 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 ATP6V1FQ16864 119 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 ZNF876PQ49A33 203 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 NRARPQ7Z6K4 114 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 SDF2L1Q9HCN8 221 aa5.12□□□□□ -1.59
CD44-232ENST00000531118 LYRM2Q9NU23 88 aaPredicted RBP5.12□□□□□ -1.59
CD44-232ENST00000531118 SLC39A9Q9NUM3 307 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms