RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RPP21Q9H633 154 aaKnown RBP3.49□□□□□ -1.85
SSBP3-213ENST00000530618 PHLDA3Q9Y5J5 127 aa3.49□□□□□ -1.85
SSBP3-213ENST00000530618 TRGV2A0A075B6R0 118 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 A0A1B0GW15 77 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 FAM231BA6NCW3 169 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 LYRM9A8MSI8 78 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 IGLV2-11P01706 119 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 TRGC1P0CF51 173 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 DEFB1P60022 68 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 CACNG7P62955 275 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 LGALS9BQ3B8N2 356 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 TDRG1Q3Y452 100 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 PIK3CD-AS1Q5SR53 167 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 SPANXN1Q5VSR9 72 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 ZFAND6Q6FIF0 208 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 LINC00322Q6ZN03 302 aaPredicted RBP3.48□□□□□ -1.85
SSBP3-213ENST00000530618 ZNF705AQ6ZN79 300 aaPredicted RBP3.48□□□□□ -1.85
SSBP3-213ENST00000530618 FAM231DQ6ZW35 169 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 ZFP82Q8N141 532 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.48□□□□□ -1.85
SSBP3-213ENST00000530618 FER1L6-AS1Q8NA97 138 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 NHLRC2Q8NBF2 726 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 ZC2HC1AQ96GY0 325 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 C8orf49Q96NF6 230 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 DERL1Q9BUN8 251 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 MLST8Q9BVC4 326 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 TPPP3Q9BW30 176 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 CTDSP1Q9GZU7 261 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 GFRA4Q9GZZ7 299 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 C11orf68Q9H3H3 251 aaKnown RBP3.48□□□□□ -1.85
SSBP3-213ENST00000530618 OSTCQ9NRP0 149 aa3.48□□□□□ -1.85
SSBP3-213ENST00000530618 CXorf65A6NEN9 183 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 A8MWV9 139 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 M0R2P5 195 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 RHODO00212 210 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 CRXO43186 299 aaPredicted RBP3.47□□□□□ -1.85
SSBP3-213ENST00000530618 ZNF324O75467 553 aaPredicted RBP3.47□□□□□ -1.85
SSBP3-213ENST00000530618 APOC3P02656 99 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 EMP1P54849 157 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 TCL1AP56279 114 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 DAD1P61803 113 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 RPL23P62829 140 aaKnown RBP3.47□□□□□ -1.85
SSBP3-213ENST00000530618 DAZ2Q13117 558 aaKnown RBP3.47□□□□□ -1.85
SSBP3-213ENST00000530618 SLAQ13239 276 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 RIGQ13278 110 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 MUC21Q5SSG8 566 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 OCC1Q8TAD7 63 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 TSKUQ8WUA8 353 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 ISOC2Q96AB3 205 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 AP1S3Q96PC3 154 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 IL36BQ9NZH7 164 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 NAT8BQ9UHF3 227 aa3.47□□□□□ -1.85
SSBP3-213ENST00000530618 FAT1Q14517 4588 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TRAV9-1A0A075B6T8 112 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 A0A087WWC5 75 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TMSB15BA0A087X1C1 80 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TRGV1A0A0A0MS02 117 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 C19orf71A6NCJ1 209 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 H3BVH4 76 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TYMSP04818 313 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 OR5AL1P0C617 328 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 AZU1P20160 251 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 SRSF3P84103 164 aaKnown RBP3.46□□□□□ -1.86
SSBP3-213ENST00000530618 COX19Q49B96 90 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 DNLZQ5SXM8 178 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 WDR73Q6P4I2 378 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 C1orf158Q8N1D5 194 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 CSNK1G2-AS1Q8NCQ2 148 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 NUDT10Q8NFP7 164 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 C11orf45Q8TAV5 145 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 RNASE8Q8TDE3 154 aaKnown RBP3.46□□□□□ -1.86
SSBP3-213ENST00000530618 PTH2Q96A98 100 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 NUDT11Q96G61 164 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 IMMP2LQ96T52 175 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 RNASE7Q9H1E1 156 aaKnown RBP3.46□□□□□ -1.86
SSBP3-213ENST00000530618 RETNQ9HD89 108 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 NOP10Q9NPE3 64 aaKnown RBP3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TMEM242Q9NWH2 141 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TP53TG3Q9ULZ0 132 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 CARHSP1Q9Y2V2 147 aaKnown RBP3.46□□□□□ -1.86
SSBP3-213ENST00000530618 DNAH8Q96JB1 4490 aa3.46□□□□□ -1.86
SSBP3-213ENST00000530618 TRBV20OR9-2A0A075B6H5 130 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 TRGV4A0A0C4DH28 118 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 A0A1B0GUT8 65 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 PGPEP1LA6NFU8 196 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 C9JQL5 133 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 H7C1H1 209 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 K7EN84 100 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 M0R381 172 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 PPP1R17O96001 155 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 ATP5G1P05496 136 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 GIG44P09565 113 aaPredicted RBP3.45□□□□□ -1.86
SSBP3-213ENST00000530618 ARMS2P0C7Q2 107 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 PRB4P10163 310 aaPredicted RBP3.45□□□□□ -1.86
SSBP3-213ENST00000530618 ZNF80P51504 273 aaPredicted RBP3.45□□□□□ -1.86
SSBP3-213ENST00000530618 TWIST1Q15672 202 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 RNF212Q495C1 297 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms