RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 IBA57Q5T440 356 aaKnown RBP8.41□□□□□ -1.06
USH1C-208ENST00000529563 PRR27Q6MZM9 219 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 Q6ZTI0 123 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 Q8N1X5 172 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 LINC00612Q8N6U2 182 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 KLF12Q9Y4X4 402 aa8.41□□□□□ -1.06
USH1C-208ENST00000529563 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
USH1C-208ENST00000529563 LTAP01374 205 aa8.4□□□□□ -1.06
USH1C-208ENST00000529563 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
USH1C-208ENST00000529563 NHLRC2Q8NBF2 726 aa8.4□□□□□ -1.06
USH1C-208ENST00000529563 SPXQ9BT56 116 aa8.4□□□□□ -1.06
USH1C-208ENST00000529563 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
USH1C-208ENST00000529563 B4DEV8 164 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 M0R036 132 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 SIVA1O15304 175 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 BTF3P20290 206 aaKnown RBP8.39□□□□□ -1.07
USH1C-208ENST00000529563 ASIPP42127 132 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 TCL1AP56279 114 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 PEA15Q15121 130 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 TP53TG3Q9ULZ0 132 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
USH1C-208ENST00000529563 A0A096LPF7 62 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 PAX4O43316 350 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 GNRH2O43555 120 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 SH2D1AO60880 128 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 IGHV3-53P01767 116 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 LINC00315P59091 139 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 CENPWQ5EE01 88 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 PCNPQ8WW12 178 aaKnown RBP8.38□□□□□ -1.07
USH1C-208ENST00000529563 ZC2HC1AQ96GY0 325 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 FAM210AQ96ND0 272 aa8.38□□□□□ -1.07
USH1C-208ENST00000529563 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 TMEM250H0YL14 139 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 NXPH4O95158 308 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 TYMSP04818 313 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 ZNF80P51504 273 aaPredicted RBP8.37□□□□□ -1.07
USH1C-208ENST00000529563 TDRG1Q3Y452 100 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 Q6ZQT7 251 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 DERL1Q9BUN8 251 aa8.37□□□□□ -1.07
USH1C-208ENST00000529563 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 XKRY2A2RUG3 117 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 RAB19A4D1S5 217 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 C9JCJ5 164 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 VSIG2Q96IQ7 327 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
USH1C-208ENST00000529563 MDFICQ9P1T7 246 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 HSPG2P98160 4391 aa8.36□□□□□ -1.07
USH1C-208ENST00000529563 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 M0R2P5 195 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 SLAQ13239 276 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 SMIM7Q9BQ49 75 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 PARLQ9H300 379 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
USH1C-208ENST00000529563 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 GRIFINA4D1Z8 144 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 ZNF727A8MUV8 499 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 SPINK4O60575 86 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 P01737 135 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
USH1C-208ENST00000529563 MRPL23Q16540 153 aaKnown RBP8.34□□□□□ -1.07
USH1C-208ENST00000529563 ZNF876PQ49A33 203 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 NFE4Q86UQ8 179 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
USH1C-208ENST00000529563 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 H3BVH4 76 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 SRIP30626 198 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 TPPP3Q9BW30 176 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 SMDT1Q9H4I9 107 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 HHLA3Q9XRX5 114 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 LY96Q9Y6Y9 160 aa8.33□□□□□ -1.08
USH1C-208ENST00000529563 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 IGKV3D-20A0A0C4DH25 116 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
USH1C-208ENST00000529563 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
USH1C-208ENST00000529563 CRIP1P50238 77 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 FAM74A3Q4VXF1 159 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 NEGR1Q7Z3B1 354 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 MLST8Q9BVC4 326 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 C11orf21Q9P2W6 132 aa8.32□□□□□ -1.08
USH1C-208ENST00000529563 PGPEP1LA6NFU8 196 aa8.31□□□□□ -1.08
USH1C-208ENST00000529563 SRP19P09132 144 aaKnown RBP8.31□□□□□ -1.08
USH1C-208ENST00000529563 ARMS2P0C7Q2 107 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms