RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 PGLYRP4Q96LB8 373 aa3.69□□□□□ -1.82
CD44-230ENST00000528922 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
CD44-230ENST00000528922 DPM3Q9P2X0 92 aa3.69□□□□□ -1.82
CD44-230ENST00000528922 PSG8Q9UQ74 426 aa3.69□□□□□ -1.82
CD44-230ENST00000528922 HLA-DRB4X5D2U9 266 aa3.69□□□□□ -1.82
CD44-230ENST00000528922 USP9YO00507 2555 aaPredicted RBP3.68□□□□□ -1.82
CD44-230ENST00000528922 TRAV5A0A0B4J249 113 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 PPIAL4CA0A0B4J2A2 164 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 A0A1B0GUS0 222 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 C7orf71A4D174 169 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 FABP5P3A8MUU1 101 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 H3BRM9 83 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 NBR2O15453 112 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 ATP5LO75964 103 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 SMIM17P0DL12 118 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 PPIAL4GP0DN37 164 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 CCL3L1P16619 93 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 LOXP28300 417 aaPredicted RBP3.68□□□□□ -1.82
CD44-230ENST00000528922 BSPH1Q075Z2 132 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 TAL2Q16559 108 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 TDRG1Q3Y452 100 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 MINOS1Q5TGZ0 78 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 FAM104BQ5XKR9 115 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 EBLN2Q6P2I7 272 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 CD164L2Q6UWJ8 174 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 GOLT1AQ6ZVE7 132 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 KIR3DL3Q8N743 410 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.68□□□□□ -1.82
CD44-230ENST00000528922 MRPL53Q96EL3 112 aaKnown RBP3.68□□□□□ -1.82
CD44-230ENST00000528922 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 MAP1LC3AQ9H492 121 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 RPH3ALQ9UNE2 315 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 MINOS1-NBL1R4GNA1 71 aa3.68□□□□□ -1.82
CD44-230ENST00000528922 SPTBN1Q01082 2364 aaKnown RBP3.67□□□□□ -1.82
CD44-230ENST00000528922 SPENQ96T58 3664 aaKnown RBP3.67□□□□□ -1.82
CD44-230ENST00000528922 FLNCQ14315 2725 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 TEX48A0A1B0GUV7 120 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 WI2-2373I1.2A0A1W2PRP0 233 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 OR2T8A6NH00 312 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 I3L2K1 104 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 NDUFA3O95167 84 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 GOSR1O95249 250 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 CA1P00915 261 aaPredicted RBP3.67□□□□□ -1.82
CD44-230ENST00000528922 TFF1P04155 84 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 CKS2P33552 79 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 CACNG7P62955 275 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 FBXL19-AS1Q494R0 122 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 TMEM97Q5BJF2 176 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 FAM201AQ5SY85 155 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 BVES-AS1Q5T3Y7 98 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 SAMD13Q5VXD3 122 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 HCP5Q6MZN7 132 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 ZNF562Q6V9R5 426 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 TTC9CQ8N5M4 171 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 OR11H6Q8NGC7 330 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 HIGD1BQ9P298 99 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 LENEPQ9Y5L5 61 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 U3KQK5 164 aa3.67□□□□□ -1.82
CD44-230ENST00000528922 IL4P05112 153 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 PRTN3P24158 256 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 GNG5P63218 68 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 MPV17L2Q567V2 206 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 LYRM7Q5U5X0 104 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 STHQ8IWL8 128 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 ZNF491Q8N8L2 437 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 FER1L6-AS1Q8NA97 138 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 GTSF1Q8WW33 167 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 ARPC1AQ92747 370 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 ZNF414Q96IQ9 312 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 VPS25Q9BRG1 176 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 CNFNQ9BYD5 112 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 C21orf62Q9NYP8 219 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 POLEQ07864 2286 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 ARFGEF3Q5TH69 2177 aa3.66□□□□□ -1.82
CD44-230ENST00000528922 OTOGQ6ZRI0 2925 aa3.65□□□□□ -1.82
CD44-230ENST00000528922 RP1L1Q8IWN7 2480 aaPredicted RBP3.65□□□□□ -1.83
CD44-230ENST00000528922 TRBV7-9A0A0J9YWB2 115 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 LINC01546A6NGU7 62 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 E7EUB6 86 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 LY6LH3BQJ8 138 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 CCL25O15444 150 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 IGKV1-17P01599 117 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 SMIM13P0DJ93 91 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 FABP2P12104 132 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 SLC25A16P16260 332 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 PLNP26678 52 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 FCER1GP30273 86 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 TFPI2P48307 235 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 EBI3Q14213 229 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 C5orf64Q2M2E5 130 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 KLK9Q2XQG4 91 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 C15orf32Q32M92 178 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 OCIAD2Q56VL3 154 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 LCN12Q6JVE5 192 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 AMN1Q8IY45 258 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 LY6G5BQ8NDX9 201 aa3.65□□□□□ -1.83
CD44-230ENST00000528922 MYOZ3Q8TDC0 251 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms