RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TRBV20-1A0A075B6N2 111 aa13.91□□□□□ -0.18
LTBP3-210ENST00000528516 TRAV8-2A0A0B4J237 113 aa13.91□□□□□ -0.18
LTBP3-210ENST00000528516 SLC50A1Q9BRV3 221 aa13.91□□□□□ -0.18
LTBP3-210ENST00000528516 TRAV12-2A0A075B6T6 113 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 ZNF815PA8K554 130 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 NBL1P41271 181 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 A8MWV9 139 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 PPDPFLQ8WWR9 84 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 SNCGO76070 127 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 IGFL2Q6UWQ7 119 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 NRGNQ92686 78 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 RHPN1-AS1Q9BWJ2 59 aa13.9□□□□□ -0.18
LTBP3-210ENST00000528516 HLA-DRB4P13762 266 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 DYNAPQ8N1N2 210 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 DUX3Q96PT4 197 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 HLA-DRB4X5D2U9 266 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 COX6B1P14854 86 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 TMEM95Q3KNT9 176 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 SMIM20Q8N5G0 67 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 K7EIM0 57 aa13.89□□□□□ -0.19
LTBP3-210ENST00000528516 SRSF1Q07955 248 aaKnown RBP eCLIP13.89□□□□□ -0.19
LTBP3-210ENST00000528516 TRAV21A0A0B4J279 112 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 TAL2Q16559 108 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 TMEM14CQ9P0S9 112 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 ERG28Q9UKR5 140 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 GAGE2BQ13066 116 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 GAGE2EQ4V326 116 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 GAGE2DQ9UEU5 116 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 ADGRG4Q8IZF6 3080 aa13.88□□□□□ -0.19
LTBP3-210ENST00000528516 PRAC2D3DTV9 90 aa13.87□□□□□ -0.19
LTBP3-210ENST00000528516 ZFP2Q6ZN57 461 aa13.87□□□□□ -0.19
LTBP3-210ENST00000528516 U3KQK5 164 aa13.87□□□□□ -0.19
LTBP3-210ENST00000528516 TRAV2A0A0B4J234 112 aa13.87□□□□□ -0.19
LTBP3-210ENST00000528516 MYMXA0A1B0GTQ4 84 aa13.87□□□□□ -0.19
LTBP3-210ENST00000528516 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
LTBP3-210ENST00000528516 SUMO2P61956 95 aaKnown RBP13.87□□□□□ -0.19
LTBP3-210ENST00000528516 LAGE3Q14657 143 aa13.87□□□□□ -0.19
LTBP3-210ENST00000528516 SYNJ2BPP57105 145 aa13.86□□□□□ -0.19
LTBP3-210ENST00000528516 CDIP1Q9H305 208 aa13.86□□□□□ -0.19
LTBP3-210ENST00000528516 TOMM7Q9P0U1 55 aa13.86□□□□□ -0.19
LTBP3-210ENST00000528516 C3orf36Q3SXR2 165 aa13.86□□□□□ -0.19
LTBP3-210ENST00000528516 LINC01587Q99440 93 aa13.86□□□□□ -0.19
LTBP3-210ENST00000528516 DMXL2Q8TDJ6 3036 aa13.86□□□□□ -0.19
LTBP3-210ENST00000528516 IGHV3-53P01767 116 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 PLNP26678 52 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 NFE4Q86UQ8 179 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 LINC00311Q8N616 119 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 HERV-K104P63124 156 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 KLK9Q9UKQ9 250 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 MOB4Q9Y3A3 225 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 TNFRSF18Q9Y5U5 241 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 CRYGCP07315 174 aa13.85□□□□□ -0.19
LTBP3-210ENST00000528516 H3BRN7 92 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 IGLV2-23P01705 113 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 SPINK13Q1W4C9 94 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 DTX2Q86UW9 622 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 Q8NA96 180 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 INS-IGF2F8WCM5 200 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 RNASE1P07998 156 aaKnown RBP13.84□□□□□ -0.19
LTBP3-210ENST00000528516 C1orf122Q6ZSJ8 110 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 ZNF876PQ49A33 203 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 AGPAT4-IT1Q9H0P7 198 aa13.84□□□□□ -0.19
LTBP3-210ENST00000528516 LINC01548A6NM66 108 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 BLCAPP62952 87 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 Q8N8P6 123 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 UBE2E2Q96LR5 201 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 H7C1H1 209 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 I3L2K1 104 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 RNF5Q99942 180 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 PRO0461Q9UI25 63 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 A0A087WX48 190 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 TMEM262E9PQX1 116 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 M0R1W7 72 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 MEIG1Q5JSS6 88 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 CFAP126Q5VTH2 177 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 TEN1Q86WV5 123 aa13.83□□□□□ -0.2
LTBP3-210ENST00000528516 KAAG1Q9UBP8 84 aa13.82□□□□□ -0.2
LTBP3-210ENST00000528516 GATD1Q8NB37 220 aa13.82□□□□□ -0.2
LTBP3-210ENST00000528516 GNRH2O43555 120 aa13.82□□□□□ -0.2
LTBP3-210ENST00000528516 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
LTBP3-210ENST00000528516 ZNF625Q96I27 306 aaPredicted RBP13.82□□□□□ -0.2
LTBP3-210ENST00000528516 PRADC1Q9BSG0 188 aa13.82□□□□□ -0.2
LTBP3-210ENST00000528516 VCX2Q9H322 139 aa13.82□□□□□ -0.2
LTBP3-210ENST00000528516 ATMQ13315 3056 aa13.82□□□□□ -0.2
LTBP3-210ENST00000528516 IGLV1-47P01700 117 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 SLC25A16P16260 332 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 ZFP36P26651 326 aaKnown RBP13.81□□□□□ -0.2
LTBP3-210ENST00000528516 MINOS1Q5TGZ0 78 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 MINOS1-NBL1R4GNA1 71 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 TEX22C9J3V5 150 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 IGHV4-39P01824 125 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 LINC01559Q495D7 138 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 RAX2Q96IS3 184 aa13.81□□□□□ -0.2
LTBP3-210ENST00000528516 C9JAW5 83 aa13.8□□□□□ -0.2
LTBP3-210ENST00000528516 RNASE13Q5GAN3 156 aaKnown RBP13.8□□□□□ -0.2
LTBP3-210ENST00000528516 CFHR4Q92496 578 aa13.8□□□□□ -0.2
LTBP3-210ENST00000528516 IGHV3-16A0A0C4DH30 117 aa13.8□□□□□ -0.2
LTBP3-210ENST00000528516 F8VRH5 84 aa13.8□□□□□ -0.2
LTBP3-210ENST00000528516 ATP6V0E2Q8NHE4 81 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms