RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TMEM218A2RU14 115 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 C3orf84H3BNL1 204 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 H3BVH4 76 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 DAD1P61803 113 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 UFSP1Q6NVU6 142 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 OR2D3Q8NGH3 330 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 GTSF1Q8WW33 167 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 JPT2Q9H910 190 aa7.56□□□□□ -1.2
NEDD8-205ENST00000527046 DEFB131BA0A096LNP1 70 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 RS1O15537 224 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 NXPH4O95158 308 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 OR5AL1P0C617 328 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 ASIPP42127 132 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 FOXA3P55318 350 aaPredicted RBP7.55□□□□□ -1.2
NEDD8-205ENST00000527046 FHL2Q14192 279 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 C10orf91Q5T1B1 145 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 UQCC3Q6UW78 93 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 ZNF479Q96JC4 524 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 SAMD10Q9BYL1 202 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 BIN3Q9NQY0 253 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 OSTCQ9NRP0 149 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 NAT8Q9UHE5 227 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 APLNQ9ULZ1 77 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 V9GYV3 84 aa7.55□□□□□ -1.2
NEDD8-205ENST00000527046 CSMD3Q7Z407 3707 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 P01737 135 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 ATP5G1P05496 136 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 CFAP126Q5VTH2 177 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 Q6ZSN1 163 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
NEDD8-205ENST00000527046 VSIG2Q96IQ7 327 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 RPP21Q9H633 154 aaKnown RBP7.54□□□□□ -1.2
NEDD8-205ENST00000527046 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
NEDD8-205ENST00000527046 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 MUC21A0A0G2JKD1 596 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 MUC21A0A140T8X8 626 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 GATCO43716 136 aaKnown RBP7.53□□□□□ -1.2
NEDD8-205ENST00000527046 CRYGDP07320 174 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 LINC00315P59091 139 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 KIF25-AS1Q9Y6Z4 181 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 STARD9Q9P2P6 4700 aa7.53□□□□□ -1.2
NEDD8-205ENST00000527046 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 IGHV3-53P01767 116 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 HTN3P15516 51 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
NEDD8-205ENST00000527046 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
NEDD8-205ENST00000527046 LYZL1Q6UWQ5 148 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 SFRP2Q96HF1 295 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 NDUFAF3Q9BU61 184 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 Q9UF83 564 aa7.52□□□□□ -1.21
NEDD8-205ENST00000527046 DYNC2H1Q8NCM8 4307 aaKnown RBP7.52□□□□□ -1.21
NEDD8-205ENST00000527046 TRAV4A0A0B4J268 109 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 IGLL5B9A064 214 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 F5H768 121 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 CTRLP40313 264 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 ADIRFQ15847 76 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 CT83Q5H943 113 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 TMEM88Q6PEY1 159 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 FER1L6-AS1Q8NA97 138 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 SEC11CQ9BY50 192 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
NEDD8-205ENST00000527046 M0R381 172 aa7.5□□□□□ -1.21
NEDD8-205ENST00000527046 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-205ENST00000527046 CRYBA4P53673 196 aa7.5□□□□□ -1.21
NEDD8-205ENST00000527046 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
NEDD8-205ENST00000527046 OR4C5Q8NGB2 326 aa7.5□□□□□ -1.21
NEDD8-205ENST00000527046 TSKUQ8WUA8 353 aa7.5□□□□□ -1.21
NEDD8-205ENST00000527046 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
NEDD8-205ENST00000527046 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 A8MWL6 223 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 F2Z2F3 143 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 F8W036 122 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 NTF3P20783 257 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 SSTP61278 116 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 GFRA4Q9GZZ7 299 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 HHLA3Q9XRX5 114 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 CARHSP1Q9Y2V2 147 aaKnown RBP7.49□□□□□ -1.21
NEDD8-205ENST00000527046 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
NEDD8-205ENST00000527046 PLECQ15149 4684 aaKnown RBP7.49□□□□□ -1.21
NEDD8-205ENST00000527046 A0A087WWL8 130 aa7.48□□□□□ -1.21
NEDD8-205ENST00000527046 IGHV3-73A0A0B4J1V6 119 aa7.48□□□□□ -1.21
NEDD8-205ENST00000527046 A0A0J9YY99 117 aa7.48□□□□□ -1.21
NEDD8-205ENST00000527046 A0A1W2PPQ1 181 aa7.48□□□□□ -1.21
NEDD8-205ENST00000527046 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
NEDD8-205ENST00000527046 A8MWV9 139 aa7.48□□□□□ -1.21
NEDD8-205ENST00000527046 RNF212Q495C1 297 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms