RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 H2AFB1P0C5Y9 115 aa14.15□□□□□ -0.14
VPS28-206ENST00000526734 TCTE3Q8IZS6 198 aa14.15□□□□□ -0.14
VPS28-206ENST00000526734 KRTAP1-5Q9BYS1 174 aa14.15□□□□□ -0.14
VPS28-206ENST00000526734 IGKV3D-20A0A0C4DH25 116 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 LTAP01374 205 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 RAB5CP51148 216 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 TIRAPP58753 221 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 ZNF506Q5JVG8 444 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 DNLZQ5SXM8 178 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 FAM162BQ5T6X4 162 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 CFAP126Q5VTH2 177 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 ZC2HC1AQ96GY0 325 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 IL36BQ9NZH7 164 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 BOLA1Q9Y3E2 137 aa14.14□□□□□ -0.15
VPS28-206ENST00000526734 TRBV6-4A0A1B0GX49 114 aa14.13□□□□□ -0.15
VPS28-206ENST00000526734 B4DEV8 164 aa14.13□□□□□ -0.15
VPS28-206ENST00000526734 TNP2Q05952 138 aa14.13□□□□□ -0.15
VPS28-206ENST00000526734 RHOHQ15669 191 aa14.13□□□□□ -0.15
VPS28-206ENST00000526734 TRAV9-2A0A087WT02 112 aa14.12□□□□□ -0.15
VPS28-206ENST00000526734 PGPEP1LA6NFU8 196 aa14.12□□□□□ -0.15
VPS28-206ENST00000526734 A8MWV9 139 aa14.12□□□□□ -0.15
VPS28-206ENST00000526734 MGST1P10620 155 aaKnown RBP14.12□□□□□ -0.15
VPS28-206ENST00000526734 TEX46H3BTG2 121 aa14.11□□□□□ -0.15
VPS28-206ENST00000526734 SH2D1AO60880 128 aa14.11□□□□□ -0.15
VPS28-206ENST00000526734 ZNF674Q2M3X9 581 aa14.11□□□□□ -0.15
VPS28-206ENST00000526734 ZFP2Q6ZN57 461 aa14.11□□□□□ -0.15
VPS28-206ENST00000526734 KRBOX1C9JBD0 128 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 MED14OSP0DP75 135 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 SLC25A29Q8N8R3 303 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 NHLRC2Q8NBF2 726 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 SYT8Q8NBV8 401 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 MANBALQ9NQG1 85 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 LY96Q9Y6Y9 160 aa14.1□□□□□ -0.15
VPS28-206ENST00000526734 TRAV1-1A0A0B4J248 108 aa14.09□□□□□ -0.15
VPS28-206ENST00000526734 CRIP1P50238 77 aa14.09□□□□□ -0.15
VPS28-206ENST00000526734 LINC01559Q495D7 138 aa14.09□□□□□ -0.15
VPS28-206ENST00000526734 A0A1B0GV50 99 aa14.08□□□□□ -0.16
VPS28-206ENST00000526734 C1QBP02746 253 aa14.08□□□□□ -0.16
VPS28-206ENST00000526734 LINC00315P59091 139 aa14.08□□□□□ -0.16
VPS28-206ENST00000526734 Q6ZNX1 250 aa14.08□□□□□ -0.16
VPS28-206ENST00000526734 NFE4Q86UQ8 179 aa14.08□□□□□ -0.16
VPS28-206ENST00000526734 PARLQ9H300 379 aa14.08□□□□□ -0.16
VPS28-206ENST00000526734 LOC100131303A0A0U1RQF7 123 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 SCO2A0A1W2PP80 73 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 H3BVH4 76 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 M0R036 132 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 RHODO00212 210 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 EVI2AP22794 236 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 HERC2O95714 4834 aa14.07□□□□□ -0.16
VPS28-206ENST00000526734 ARMS2P0C7Q2 107 aa14.06□□□□□ -0.16
VPS28-206ENST00000526734 DNAH10OSP0CZ25 163 aa14.06□□□□□ -0.16
VPS28-206ENST00000526734 SLC51BQ86UW2 128 aa14.06□□□□□ -0.16
VPS28-206ENST00000526734 C10orf126Q8N4M7 172 aa14.06□□□□□ -0.16
VPS28-206ENST00000526734 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
VPS28-206ENST00000526734 CXCL1P09341 107 aa14.05□□□□□ -0.16
VPS28-206ENST00000526734 SULT1A2P50226 295 aa14.05□□□□□ -0.16
VPS28-206ENST00000526734 BAGE2Q86Y30 109 aa14.05□□□□□ -0.16
VPS28-206ENST00000526734 WFDC10BQ8IUB3 73 aa14.05□□□□□ -0.16
VPS28-206ENST00000526734 PHLDA3Q9Y5J5 127 aa14.05□□□□□ -0.16
VPS28-206ENST00000526734 DNAH11Q96DT5 4516 aa14.04□□□□□ -0.16
VPS28-206ENST00000526734 C11orf52Q96A22 123 aa14.04□□□□□ -0.16
VPS28-206ENST00000526734 MLST8Q9BVC4 326 aa14.04□□□□□ -0.16
VPS28-206ENST00000526734 SCRT2Q9NQ03 307 aa14.04□□□□□ -0.16
VPS28-206ENST00000526734 GNG13Q9P2W3 67 aa14.04□□□□□ -0.16
VPS28-206ENST00000526734 TRAV8-6A0A0B4J262 113 aa14.03□□□□□ -0.16
VPS28-206ENST00000526734 GRIFINA4D1Z8 144 aa14.03□□□□□ -0.16
VPS28-206ENST00000526734 Q6ZRN7 208 aaPredicted RBP14.03□□□□□ -0.16
VPS28-206ENST00000526734 ZFP82Q8N141 532 aa14.03□□□□□ -0.16
VPS28-206ENST00000526734 PKHD1P08F94 4074 aa14.03□□□□□ -0.16
VPS28-206ENST00000526734 KIAA1109Q2LD37 5005 aa14.02□□□□□ -0.16
VPS28-206ENST00000526734 C16orf90A8MZG2 172 aa14.02□□□□□ -0.17
VPS28-206ENST00000526734 IFNA1P01562 189 aa14.02□□□□□ -0.17
VPS28-206ENST00000526734 DMRTA1Q5VZB9 504 aa14.02□□□□□ -0.17
VPS28-206ENST00000526734 AKAP14Q86UN6 197 aa14.02□□□□□ -0.17
VPS28-206ENST00000526734 ZNF575Q86XF7 245 aa14.02□□□□□ -0.17
VPS28-206ENST00000526734 ATP6V0E2Q8NHE4 81 aa14.02□□□□□ -0.17
VPS28-206ENST00000526734 PKD1P98161 4303 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 IGHV3-38A0A0C4DH36 116 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 LELP1Q5T871 98 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 UFSP1Q6NVU6 142 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 SFRP2Q96HF1 295 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 GTSF1LQ9H1H1 148 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 MSRB1Q9NZV6 116 aa14.01□□□□□ -0.17
VPS28-206ENST00000526734 TMSB15BA0A087X1C1 80 aa14□□□□□ -0.17
VPS28-206ENST00000526734 CCL20P78556 96 aa14□□□□□ -0.17
VPS28-206ENST00000526734 LINC01556Q5JQF7 62 aa14□□□□□ -0.17
VPS28-206ENST00000526734 DYNC1H1Q14204 4646 aaKnown RBP14□□□□□ -0.17
VPS28-206ENST00000526734 EREGO14944 169 aa13.99□□□□□ -0.17
VPS28-206ENST00000526734 PDE6DO43924 150 aa13.99□□□□□ -0.17
VPS28-206ENST00000526734 CRYGDP07320 174 aa13.99□□□□□ -0.17
VPS28-206ENST00000526734 TAGLN2P37802 199 aaKnown RBP13.99□□□□□ -0.17
VPS28-206ENST00000526734 RPL35P42766 123 aaKnown RBP13.99□□□□□ -0.17
VPS28-206ENST00000526734 OR10J3Q5JRS4 329 aa13.99□□□□□ -0.17
VPS28-206ENST00000526734 SMIM12Q96EX1 92 aa13.99□□□□□ -0.17
VPS28-206ENST00000526734 M0R381 172 aa13.98□□□□□ -0.17
VPS28-206ENST00000526734 LINC00694P0DN24 101 aa13.98□□□□□ -0.17
VPS28-206ENST00000526734 ERVFC1-1P60608 527 aa13.98□□□□□ -0.17
VPS28-206ENST00000526734 SPATA12Q7Z6I5 190 aa13.98□□□□□ -0.17
VPS28-206ENST00000526734 JPT2Q9H910 190 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms