RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 DUSP14O95147 198 aaKnown RBP11.85□□□□□ -0.51
USH1C-204ENST00000526313 OR9G4Q8NGQ1 327 aa11.85□□□□□ -0.51
USH1C-204ENST00000526313 DPF1Q92782 380 aa11.85□□□□□ -0.51
USH1C-204ENST00000526313 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
USH1C-204ENST00000526313 ITPR2Q14571 2701 aa11.85□□□□□ -0.51
USH1C-204ENST00000526313 TCAPO15273 167 aa11.84□□□□□ -0.51
USH1C-204ENST00000526313 POM121L12Q8N7R1 296 aa11.84□□□□□ -0.51
USH1C-204ENST00000526313 SONP18583 2426 aaKnown RBP11.84□□□□□ -0.51
USH1C-204ENST00000526313 ANK3Q12955 4377 aaKnown RBP11.84□□□□□ -0.51
USH1C-204ENST00000526313 A8MTW9 85 aa11.84□□□□□ -0.51
USH1C-204ENST00000526313 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
USH1C-204ENST00000526313 AMTNQ6UX39 209 aa11.84□□□□□ -0.51
USH1C-204ENST00000526313 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
USH1C-204ENST00000526313 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
USH1C-204ENST00000526313 TRAV12-3A0A0B4J271 114 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 M0R381 172 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 FCER1GP30273 86 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 DLX4Q92988 240 aaPredicted RBP11.83□□□□□ -0.52
USH1C-204ENST00000526313 YAE1D1Q9NRH1 226 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 UNC79Q9P2D8 2635 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 SPRY2O43597 315 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 TSPOP30536 169 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 CDKN1BP46527 198 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 ST20Q9HBF5 79 aa11.83□□□□□ -0.52
USH1C-204ENST00000526313 TRAV26-2A0A0B4J265 109 aa11.82□□□□□ -0.52
USH1C-204ENST00000526313 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
USH1C-204ENST00000526313 MUC4Q99102 2169 aa11.82□□□□□ -0.52
USH1C-204ENST00000526313 RNASE1P07998 156 aaKnown RBP11.81□□□□□ -0.52
USH1C-204ENST00000526313 FXYD7P58549 80 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 LGALS9CQ6DKI2 356 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 DUX3Q96PT4 197 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 C16orf95Q9H693 158 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 LINC00315P59091 139 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 C9orf85Q96MD7 179 aa11.81□□□□□ -0.52
USH1C-204ENST00000526313 MCRIP2Q9BUT9 160 aaKnown RBP11.81□□□□□ -0.52
USH1C-204ENST00000526313 FHL3Q13643 280 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 C14orf178Q8N769 122 aaPredicted RBP11.8□□□□□ -0.52
USH1C-204ENST00000526313 IFI27L1Q96BM0 104 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 DEFB114Q30KQ6 69 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 RASL10AQ92737 203 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 AP1S3Q96PC3 154 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
USH1C-204ENST00000526313 AGRNO00468 2067 aa11.79□□□□□ -0.52
USH1C-204ENST00000526313 hDV102S1A0JD36 115 aa11.79□□□□□ -0.52
USH1C-204ENST00000526313 IGKV3-20P01619 116 aa11.79□□□□□ -0.52
USH1C-204ENST00000526313 KHDC1LQ5JSQ8 128 aa11.79□□□□□ -0.52
USH1C-204ENST00000526313 RAX2Q96IS3 184 aa11.79□□□□□ -0.52
USH1C-204ENST00000526313 TRAV12-2A0A075B6T6 113 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 CD7P09564 240 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 HLA-DRB4P13762 266 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 SPINK13Q1W4C9 94 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 Q6ZN92 141 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 MRPS16Q9Y3D3 137 aaKnown RBP11.78□□□□□ -0.52
USH1C-204ENST00000526313 HLA-DRB4X5D2U9 266 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 SORL1Q92673 2214 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 IGHV1OR15-1A0A075B7D0 117 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 H0Y8G0 127 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 SCGB2A2Q13296 93 aa11.78□□□□□ -0.52
USH1C-204ENST00000526313 ACANP16112 2415 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 H3BMM0 161 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 DEFB131AP59861 70 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 LAGE3Q14657 143 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 LINC01006Q8NI28 216 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 PMCHL2Q9BQD1 86 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.52
USH1C-204ENST00000526313 HSBP1L1C9JCN9 74 aa11.77□□□□□ -0.53
USH1C-204ENST00000526313 CD28P10747 220 aa11.77□□□□□ -0.53
USH1C-204ENST00000526313 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.53
USH1C-204ENST00000526313 PPP1R17O96001 155 aa11.76□□□□□ -0.53
USH1C-204ENST00000526313 SUMO2P61956 95 aaKnown RBP11.76□□□□□ -0.53
USH1C-204ENST00000526313 HIST2H2BDQ6DRA6 164 aa11.76□□□□□ -0.53
USH1C-204ENST00000526313 Q8N1Y9 231 aa11.76□□□□□ -0.53
USH1C-204ENST00000526313 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
USH1C-204ENST00000526313 NF1P21359 2839 aa11.76□□□□□ -0.53
USH1C-204ENST00000526313 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
USH1C-204ENST00000526313 K7EMI3 77 aa11.75□□□□□ -0.53
USH1C-204ENST00000526313 ZNF256Q9Y2P7 627 aaPredicted RBP11.75□□□□□ -0.53
USH1C-204ENST00000526313 GOLT1BQ9Y3E0 138 aa11.75□□□□□ -0.53
USH1C-204ENST00000526313 TRAV25A0A0B4J276 109 aa11.75□□□□□ -0.53
USH1C-204ENST00000526313 G0S2P27469 103 aa11.75□□□□□ -0.53
USH1C-204ENST00000526313 DYNLRB2Q8TF09 96 aa11.75□□□□□ -0.53
USH1C-204ENST00000526313 CCL24O00175 119 aa11.74□□□□□ -0.53
USH1C-204ENST00000526313 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
USH1C-204ENST00000526313 HILS1P60008 231 aa11.74□□□□□ -0.53
USH1C-204ENST00000526313 RPL32P62910 135 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 CD300EQ496F6 205 aaPredicted RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 SPAG8Q99932 426 aaPredicted RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
USH1C-204ENST00000526313 RBMY1BA6NDE4 496 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 RBMY1EA6NEQ0 496 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 RBMY1DP0C7P1 496 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
USH1C-204ENST00000526313 RBMY1CP0DJD4 496 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms