RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 XKRY2A2RUG3 117 aa14.64□□□□□ -0.07
CD44-222ENST00000526025 H3BVH4 76 aa14.64□□□□□ -0.07
CD44-222ENST00000526025 ARMS2P0C7Q2 107 aa14.64□□□□□ -0.07
CD44-222ENST00000526025 RPL19P84098 196 aaKnown RBP14.64□□□□□ -0.07
CD44-222ENST00000526025 SOHLH1Q5JUK2 328 aa14.64□□□□□ -0.07
CD44-222ENST00000526025 UQCC3Q6UW78 93 aa14.64□□□□□ -0.07
CD44-222ENST00000526025 NAT8Q9UHE5 227 aa14.64□□□□□ -0.07
CD44-222ENST00000526025 GRIFINA4D1Z8 144 aa14.63□□□□□ -0.07
CD44-222ENST00000526025 TMEM241Q24JQ0 296 aa14.63□□□□□ -0.07
CD44-222ENST00000526025 ZNF876PQ49A33 203 aa14.63□□□□□ -0.07
CD44-222ENST00000526025 NUDT10Q8NFP7 164 aa14.63□□□□□ -0.07
CD44-222ENST00000526025 OR2D3Q8NGH3 330 aa14.63□□□□□ -0.07
CD44-222ENST00000526025 NUDT11Q96G61 164 aa14.63□□□□□ -0.07
CD44-222ENST00000526025 SSBP4Q9BWG4 385 aaPredicted RBP14.63□□□□□ -0.07
CD44-222ENST00000526025 TRAV4A0A0B4J268 109 aa14.62□□□□□ -0.07
CD44-222ENST00000526025 SNAI2O43623 268 aa14.62□□□□□ -0.07
CD44-222ENST00000526025 CIDEAO60543 219 aa14.62□□□□□ -0.07
CD44-222ENST00000526025 OR5AL1P0C617 328 aa14.62□□□□□ -0.07
CD44-222ENST00000526025 HTN3P15516 51 aa14.62□□□□□ -0.07
CD44-222ENST00000526025 PLECQ15149 4684 aaKnown RBP14.62□□□□□ -0.07
CD44-222ENST00000526025 F5H768 121 aa14.61□□□□□ -0.07
CD44-222ENST00000526025 SYT8Q8NBV8 401 aa14.61□□□□□ -0.07
CD44-222ENST00000526025 RNASE7Q9H1E1 156 aaKnown RBP14.61□□□□□ -0.07
CD44-222ENST00000526025 RPP21Q9H633 154 aaKnown RBP14.61□□□□□ -0.07
CD44-222ENST00000526025 PHLDA3Q9Y5J5 127 aa14.61□□□□□ -0.07
CD44-222ENST00000526025 IGHV4-4A0A075B6R2 117 aa14.6□□□□□ -0.07
CD44-222ENST00000526025 IGLL5B9A064 214 aa14.6□□□□□ -0.07
CD44-222ENST00000526025 NXPH4O95158 308 aa14.6□□□□□ -0.07
CD44-222ENST00000526025 IGLC6P0CF74 106 aa14.6□□□□□ -0.07
CD44-222ENST00000526025 CT83Q5H943 113 aa14.6□□□□□ -0.07
CD44-222ENST00000526025 ZFP82Q8N141 532 aa14.6□□□□□ -0.07
CD44-222ENST00000526025 LINC00862A6NCI5 91 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 A8MWV9 139 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 H3BNG1 76 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 RS1O15537 224 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 SFTA3P0C7M3 94 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 SLAQ13239 276 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 POM121L12Q8N7R1 296 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 OSTCQ9NRP0 149 aa14.59□□□□□ -0.07
CD44-222ENST00000526025 A0A1W2PPQ1 181 aa14.58□□□□□ -0.08
CD44-222ENST00000526025 HOXA5P20719 270 aa14.58□□□□□ -0.08
CD44-222ENST00000526025 ERVFC1-1P60608 527 aa14.58□□□□□ -0.08
CD44-222ENST00000526025 RPL23P62829 140 aaKnown RBP14.58□□□□□ -0.08
CD44-222ENST00000526025 OR4C5Q8NGB2 326 aa14.58□□□□□ -0.08
CD44-222ENST00000526025 ISOC2Q96AB3 205 aa14.58□□□□□ -0.08
CD44-222ENST00000526025 F2Z2F3 143 aa14.57□□□□□ -0.08
CD44-222ENST00000526025 GATCO43716 136 aaKnown RBP14.57□□□□□ -0.08
CD44-222ENST00000526025 TMEM88Q6PEY1 159 aa14.57□□□□□ -0.08
CD44-222ENST00000526025 C15orf53Q8NAA6 179 aa14.57□□□□□ -0.08
CD44-222ENST00000526025 APLNQ9ULZ1 77 aa14.57□□□□□ -0.08
CD44-222ENST00000526025 FHL2Q14192 279 aa14.56□□□□□ -0.08
CD44-222ENST00000526025 CFAP126Q5VTH2 177 aa14.56□□□□□ -0.08
CD44-222ENST00000526025 DMRTA1Q5VZB9 504 aa14.56□□□□□ -0.08
CD44-222ENST00000526025 C15orf54Q8N8G6 183 aa14.56□□□□□ -0.08
CD44-222ENST00000526025 FER1L6-AS1Q8NA97 138 aa14.56□□□□□ -0.08
CD44-222ENST00000526025 ZNF479Q96JC4 524 aa14.56□□□□□ -0.08
CD44-222ENST00000526025 A8MWL6 223 aa14.55□□□□□ -0.08
CD44-222ENST00000526025 ADIRFQ15847 76 aa14.55□□□□□ -0.08
CD44-222ENST00000526025 ZFP2Q6ZN57 461 aa14.55□□□□□ -0.08
CD44-222ENST00000526025 COMMD7Q86VX2 200 aa14.55□□□□□ -0.08
CD44-222ENST00000526025 OR10AG1Q8NH19 301 aa14.55□□□□□ -0.08
CD44-222ENST00000526025 PRO0255Q9UI72 69 aa14.55□□□□□ -0.08
CD44-222ENST00000526025 IGHV3-53P01767 116 aa14.54□□□□□ -0.08
CD44-222ENST00000526025 GZMBP10144 247 aa14.54□□□□□ -0.08
CD44-222ENST00000526025 CTRLP40313 264 aa14.54□□□□□ -0.08
CD44-222ENST00000526025 CACNG7P62955 275 aa14.54□□□□□ -0.08
CD44-222ENST00000526025 PNRC1Q12796 327 aaPredicted RBP14.54□□□□□ -0.08
CD44-222ENST00000526025 WDR73Q6P4I2 378 aa14.54□□□□□ -0.08
CD44-222ENST00000526025 SFRP2Q96HF1 295 aa14.54□□□□□ -0.08
CD44-222ENST00000526025 TRAV26-1A0A087WT03 109 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 TRGV4A0A0C4DH28 118 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 FAM231BA6NCW3 169 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 M0R381 172 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 RHODO00212 210 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 LYSTQ99698 3801 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 CNFNQ9BYD5 112 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 GFRA4Q9GZZ7 299 aa14.53□□□□□ -0.08
CD44-222ENST00000526025 CRYBA4P53673 196 aa14.52□□□□□ -0.09
CD44-222ENST00000526025 FOXA3P55318 350 aaPredicted RBP14.52□□□□□ -0.09
CD44-222ENST00000526025 SPANXN1Q5VSR9 72 aa14.52□□□□□ -0.09
CD44-222ENST00000526025 HHLA3Q9XRX5 114 aa14.52□□□□□ -0.09
CD44-222ENST00000526025 ALMS1Q8TCU4 4167 aa14.52□□□□□ -0.09
CD44-222ENST00000526025 TMEM218A2RU14 115 aa14.51□□□□□ -0.09
CD44-222ENST00000526025 GATA1P15976 413 aaPredicted RBP14.51□□□□□ -0.09
CD44-222ENST00000526025 UFSP1Q6NVU6 142 aa14.51□□□□□ -0.09
CD44-222ENST00000526025 TSKUQ8WUA8 353 aa14.51□□□□□ -0.09
CD44-222ENST00000526025 VSIG2Q96IQ7 327 aa14.51□□□□□ -0.09
CD44-222ENST00000526025 V9GYV3 84 aa14.51□□□□□ -0.09
CD44-222ENST00000526025 LYZL1Q6UWQ5 148 aa14.5□□□□□ -0.09
CD44-222ENST00000526025 OR10G8Q8NGN5 311 aa14.5□□□□□ -0.09
CD44-222ENST00000526025 GTSF1Q8WW33 167 aa14.5□□□□□ -0.09
CD44-222ENST00000526025 TPPP3Q9BW30 176 aa14.5□□□□□ -0.09
CD44-222ENST00000526025 PAX4O43316 350 aa14.49□□□□□ -0.09
CD44-222ENST00000526025 TRBV6-4A0A1B0GX49 114 aa14.48□□□□□ -0.09
CD44-222ENST00000526025 CRYGDP07320 174 aa14.48□□□□□ -0.09
CD44-222ENST00000526025 LGALS9CQ6DKI2 356 aa14.48□□□□□ -0.09
CD44-222ENST00000526025 AP1S3Q96PC3 154 aa14.48□□□□□ -0.09
CD44-222ENST00000526025 SEC11CQ9BY50 192 aa14.48□□□□□ -0.09
CD44-222ENST00000526025 JPT2Q9H910 190 aa14.48□□□□□ -0.09
CD44-222ENST00000526025 A0A0J9YY99 117 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms