RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 PTTG1O95997 202 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 IGLV2-11P01706 119 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 MBP02144 154 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 ORM1P02763 201 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 GCSHP23434 173 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 ATP6V0CP27449 155 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 RAB2AP61019 212 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 TMEM183BQ1AE95 376 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 Q5BKY6 102 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 MUC21Q5SSG8 566 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 CST9LP1Q5W188 147 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 FAM159AQ6UWV7 190 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 GOLT1AQ6ZVE7 132 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 SPATA12Q7Z6I5 190 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 TMEM183AQ8IXX5 376 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 ZNF479Q96JC4 524 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 HYLS1Q96M11 299 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 TREM1Q9NP99 234 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 TNFSF18Q9UNG2 199 aa4.04□□□□□ -1.76
CCDC90B-204ENST00000525504 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 TRAV8-1A0A0A6YYK1 113 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 TRAV4A0A0B4J268 109 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 FBLL1A6NHQ2 334 aaKnown RBP4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 CIDEAO60543 219 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 TCRAP04437 139 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 GIPP09681 153 aaPredicted RBP4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 SFTA3P0C7M3 94 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 DNAH10OSP0CZ25 163 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 ARL14EPLP0DKL9 152 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 GATA1P15976 413 aaPredicted RBP4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 GCHFRP30047 84 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 LINC00315P59091 139 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 SH2D6Q7Z4S9 175 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 C5orf17Q8NAS9 161 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 KCNS1Q96KK3 526 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 MED28Q9H204 178 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 EPDR1Q9UM22 224 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 MUC4Q99102 2169 aa4.03□□□□□ -1.76
CCDC90B-204ENST00000525504 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 TRAV9-2A0A087WT02 112 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 A0A1W2PRE2 83 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 TAAR5O14804 337 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 HMGB3O15347 200 aaKnown RBP4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 RS1O15537 224 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 CXorf1O96002 111 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 TYMSP04818 313 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 CDC34P49427 236 aaPredicted RBP4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 ZNF80P51504 273 aaPredicted RBP4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 GNG5P63218 68 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 SAPCD1Q5SSQ6 148 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 HSD17B11Q8NBQ5 300 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 OR4C5Q8NGB2 326 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 C9orf85Q96MD7 179 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 FAM210AQ96ND0 272 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 TXNDC17Q9BRA2 123 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 ACTR3CQ9C0K3 210 aaPredicted RBP4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 SDF2L1Q9HCN8 221 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 TMEM167BQ9NRX6 74 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 PSG8Q9UQ74 426 aa4.02□□□□□ -1.77
CCDC90B-204ENST00000525504 HERC1Q15751 4861 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 NACAE9PAV3 2078 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 A0A087WTM6 91 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 TRBV6-4A0A1B0GX49 114 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 RNF222A6NCQ9 220 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 C9JCJ5 164 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 G3V3Q6 166 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 PFN1P07737 140 aaKnown RBP4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 RNASE3P12724 160 aaKnown RBP4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 SRIP30626 198 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 FLI1Q01543 452 aaPredicted RBP4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 ZNF726P1Q15940 193 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 CFAP126Q5VTH2 177 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 RPL7L1Q6DKI1 246 aaKnown RBP4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 DPPA3Q6W0C5 159 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 CYB561D1Q8N8Q1 229 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 TMEM75Q8N9X5 138 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 SGK494Q96LW2 274 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 SH3BGRL3Q9H299 93 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 LY96Q9Y6Y9 160 aa4.01□□□□□ -1.77
CCDC90B-204ENST00000525504 IGKV3D-20A0A0C4DH25 116 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 F6UZH7 168 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 K7EQM0 130 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 GCGP01275 180 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 EVI2AP22794 236 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 CRIP1P50238 77 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 BLOC1S1P78537 153 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 ZNF876PQ49A33 203 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 SMUG1Q53HV7 270 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 LINC01556Q5JQF7 62 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 DNLZQ5SXM8 178 aa4□□□□□ -1.77
CCDC90B-204ENST00000525504 UFSP1Q6NVU6 142 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms