RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 TRGV1A0A0A0MS02 117 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
SMCO4-202ENST00000525141 RASL10AQ92737 203 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 SMIM12Q96EX1 92 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 DERL1Q9BUN8 251 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 MED9Q9NWA0 146 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 LINC00588Q9Y4M8 146 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 MUC4Q99102 2169 aa8.72□□□□□ -1.01
SMCO4-202ENST00000525141 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 TMEM250H0YL14 139 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 M0R2P5 195 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 SH2D1AO60880 128 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 NUDT3O95989 172 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 ORM1P02763 201 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 ZNF506Q5JVG8 444 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 DNLZQ5SXM8 178 aa8.71□□□□□ -1.02
SMCO4-202ENST00000525141 TRGV2A0A075B6R0 118 aa8.7□□□□□ -1.02
SMCO4-202ENST00000525141 KRBOX1C9JBD0 128 aa8.7□□□□□ -1.02
SMCO4-202ENST00000525141 FAM3BP58499 235 aaPredicted RBP8.7□□□□□ -1.02
SMCO4-202ENST00000525141 NHLRC2Q8NBF2 726 aa8.7□□□□□ -1.02
SMCO4-202ENST00000525141 PTH2Q96A98 100 aa8.7□□□□□ -1.02
SMCO4-202ENST00000525141 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
SMCO4-202ENST00000525141 RYR1P21817 5038 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 B4DEV8 164 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 IGLV2-8P01709 118 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 GNG4P50150 75 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 OR5I1Q13606 314 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
SMCO4-202ENST00000525141 EIF5A2Q9GZV4 153 aaKnown RBP8.69□□□□□ -1.02
SMCO4-202ENST00000525141 MRPL16Q9NX20 251 aaKnown RBP8.69□□□□□ -1.02
SMCO4-202ENST00000525141 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 A0A0J9YY99 117 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 RNASE3P12724 160 aaKnown RBP8.68□□□□□ -1.02
SMCO4-202ENST00000525141 ESRGQ1W209 222 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 VSIG2Q96IQ7 327 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 BIN3Q9NQY0 253 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 IL36BQ9NZH7 164 aa8.68□□□□□ -1.02
SMCO4-202ENST00000525141 TRBV20OR9-2A0A075B6H5 130 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 C9JCJ5 164 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 H3BNG1 76 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 M0R036 132 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 S100A4P26447 101 aaKnown RBP8.67□□□□□ -1.02
SMCO4-202ENST00000525141 ASIPP42127 132 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 SLAQ13239 276 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 ZNF876PQ49A33 203 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 PIK3CD-AS1Q5SR53 167 aa8.67□□□□□ -1.02
SMCO4-202ENST00000525141 CIDEAO60543 219 aa8.66□□□□□ -1.02
SMCO4-202ENST00000525141 CXCL1P09341 107 aa8.66□□□□□ -1.02
SMCO4-202ENST00000525141 TNP2Q05952 138 aa8.66□□□□□ -1.02
SMCO4-202ENST00000525141 PARLQ9H300 379 aa8.66□□□□□ -1.02
SMCO4-202ENST00000525141 SMDT1Q9H4I9 107 aa8.66□□□□□ -1.02
SMCO4-202ENST00000525141 Q9H8V8 135 aa8.66□□□□□ -1.02
SMCO4-202ENST00000525141 TRAV4A0A0B4J268 109 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 C19orf71A6NCJ1 209 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 PGPEP1LA6NFU8 196 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
SMCO4-202ENST00000525141 CCL18P55774 89 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 FHL2Q14192 279 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 PRR27Q6MZM9 219 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 PCNPQ8WW12 178 aaKnown RBP8.65□□□□□ -1.02
SMCO4-202ENST00000525141 DAZAP1Q96EP5 407 aaKnown RBP8.65□□□□□ -1.02
SMCO4-202ENST00000525141 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 SCRT2Q9NQ03 307 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
SMCO4-202ENST00000525141 A0A096LPF7 62 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 GRIFINA4D1Z8 144 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
SMCO4-202ENST00000525141 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 OR4C5Q8NGB2 326 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 ZNF479Q96JC4 524 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 PRO0255Q9UI72 69 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 LY96Q9Y6Y9 160 aa8.64□□□□□ -1.03
SMCO4-202ENST00000525141 TMSB15BA0A087X1C1 80 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 H3BVH4 76 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 RS1O15537 224 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 RAB14P61106 215 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 RPL19P84098 196 aaKnown RBP8.63□□□□□ -1.03
SMCO4-202ENST00000525141 PEA15Q15121 130 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 SYT8Q8NBV8 401 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
SMCO4-202ENST00000525141 PHLDA3Q9Y5J5 127 aa8.63□□□□□ -1.03
SMCO4-202ENST00000525141 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 A8MWV9 139 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 OR5AL1P0C617 328 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 SFTA3P0C7M3 94 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 CRYBA4P53673 196 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
SMCO4-202ENST00000525141 SMIM7Q9BQ49 75 aa8.62□□□□□ -1.03
SMCO4-202ENST00000525141 UPK3BQ9BT76 320 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms