RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CD5P06127 495 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 NMBP08949 121 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 CT45A10P0DMU9 189 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 HLA-DRB4P13762 266 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 BMI1P35226 326 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 MEOX2P50222 304 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 CNN1P51911 297 aaKnown RBP2.07□□□□□ -2.08
CSDE1-208ENST00000524652 PAFAH1B2P68402 229 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 PDE6HQ13956 83 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 HAGHQ16775 308 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 DEFB121Q5J5C9 76 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 ACTL10Q5JWF8 245 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 FOXI2Q6ZQN5 318 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 CSNK1G2-AS1Q8NCQ2 148 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF738Q8NE65 137 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF680Q8NEM1 530 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 OR8A1Q8NGG7 326 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 Q8TAT8 98 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 SFT2D1Q8WV19 159 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 RPUSD4Q96CM3 377 aaKnown RBP2.07□□□□□ -2.08
CSDE1-208ENST00000524652 FAM19A4Q96LR4 140 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 LINC00052Q96N35 136 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 RARRES2Q99969 163 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 TM2D3Q9BRN9 247 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 SLC50A1Q9BRV3 221 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 AGPAT4-IT1Q9H0P7 198 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 CLEC5AQ9NY25 188 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 RPH3ALQ9UNE2 315 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 HLA-DRB4X5D2U9 266 aa2.07□□□□□ -2.08
CSDE1-208ENST00000524652 TRBV20OR9-2A0A075B6H5 130 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 LOC102724200A0A096LPH7 203 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 TRAV1-1A0A0B4J248 108 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 TRAV34A0A0B4J273 112 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 A0A1W2PRE2 83 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF705EA8MWA4 302 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 C9JQL5 133 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 NXPH4O95158 308 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 IGLV2-8P01709 118 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 TCRAP04437 139 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 SLC25A5P05141 298 aaKnown RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 ID1P41134 155 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 CRIP1P50238 77 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF80P51504 273 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 TAS2R45P59539 299 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 SNRPD3P62318 126 aaKnown RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 EIF5AP63241 154 aaKnown RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 PSG9Q00887 426 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 HIST1H1AQ02539 215 aaPredicted RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 SRSF9Q13242 221 aaKnown RBP eCLIP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 BTN1A1Q13410 526 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 GUK1Q16774 197 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 SPINK13Q1W4C9 94 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 DEFB135Q30KP9 77 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 DPPA3Q6W0C5 159 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 GOLT1AQ6ZVE7 132 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 STHQ8IWL8 128 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 IQCF2Q8IXL9 164 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 C1orf158Q8N1D5 194 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 LYPD1Q8N2G4 141 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 ZFAND2AQ8N6M9 145 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 OR4B1Q8NGF8 309 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 LRRC20Q8TCA0 184 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 MRPL53Q96EL3 112 aaKnown RBP2.06□□□□□ -2.08
CSDE1-208ENST00000524652 C2orf48Q96LS8 159 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 IGF2BP2-AS1Q96M15 143 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 B9D2Q9BPU9 175 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 DERL1Q9BUN8 251 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 OTORQ9NRC9 128 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 TMEM167BQ9NRX6 74 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF492Q9P255 531 aa2.06□□□□□ -2.08
CSDE1-208ENST00000524652 PKHD1P08F94 4074 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 PLAC8L1A1L4L8 177 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 RAB19A4D1S5 217 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 C11orf94C9JXX5 98 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 F6UZH7 168 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 PEX7O00628 323 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF324O75467 553 aaPredicted RBP2.05□□□□□ -2.08
CSDE1-208ENST00000524652 CA1P00915 261 aaPredicted RBP2.05□□□□□ -2.08
CSDE1-208ENST00000524652 BCL2P10415 239 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 CRISP2P16562 243 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 S100A7P31151 101 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 RAB5CP51148 216 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 KRTAP10-1P60331 282 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 EIF5AL1Q6IS14 154 aaKnown RBP2.05□□□□□ -2.08
CSDE1-208ENST00000524652 PRR27Q6MZM9 219 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF705AQ6ZN79 300 aaPredicted RBP2.05□□□□□ -2.08
CSDE1-208ENST00000524652 S100A7AQ86SG5 101 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 Q86TA4 180 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 CYB561D1Q8N8Q1 229 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 TMEM75Q8N9X5 138 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 Q8NAQ8 132 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 C5orf17Q8NAS9 161 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 NHLRC2Q8NBF2 726 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 RXFP4Q8TDU9 374 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 ZC2HC1AQ96GY0 325 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 FAM210AQ96ND0 272 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 ATG101Q9BSB4 218 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 TUBA4BQ9H853 241 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms