RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 LAMA3Q16787 3333 aa3.22□□□□□ -1.89
SKP1-213ENST00000524288 CNTRLQ7Z7A1 2325 aa3.21□□□□□ -1.89
SKP1-213ENST00000524288 TRAV30A0A087WSZ9 112 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 DPRXA6NFQ7 191 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 C2orf70A6NJV1 201 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 GGTLC3B5MD39 225 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 M0QXV9 152 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 SLC17A3O00476 420 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 CCL25O15444 150 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 GABRA2P47869 451 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 GNG4P50150 75 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 TAS2R45P59539 299 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 KRTDAPP60985 99 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 HSPE1P61604 102 aaKnown RBP3.21□□□□□ -1.9
SKP1-213ENST00000524288 PRCDQ00LT1 54 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 SPATA31B1PQ5VZV4 182 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 OR8I2Q8N0Y5 310 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 ZNF439Q8NDP4 499 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 ZNF738Q8NE65 137 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 OR1L8Q8NGR8 309 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 OR2V2Q96R30 315 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 TTTY12Q9BZ98 90 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 ST20Q9HBF5 79 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 ZNF492Q9P255 531 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 NAT8BQ9UHF3 227 aa3.21□□□□□ -1.9
SKP1-213ENST00000524288 PCNX2A6NKB5 2137 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 SZT2Q5T011 3432 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 MED13Q9UHV7 2174 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 TCF21O43680 179 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 IGLV7-43P04211 117 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 PRTN3P24158 256 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 SRIP30626 198 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 CA7P43166 264 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 UBE2G1P62253 170 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 COTL1Q14019 142 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 MMDQ15546 238 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 IBA57Q5T440 356 aaKnown RBP3.2□□□□□ -1.9
SKP1-213ENST00000524288 FAM104BQ5XKR9 115 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 MIR17HGQ75NE6 70 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 BOD1L2Q8IYS8 172 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 TMEM251Q8N6I4 163 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 SLC25A40Q8TBP6 338 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 CHCHD1Q96BP2 118 aaKnown RBP3.2□□□□□ -1.9
SKP1-213ENST00000524288 FAM167A-AS1Q96KT0 104 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 NABP2Q9BQ15 211 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 BET1LQ9NYM9 111 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 IDI2-AS1Q9NZ38 188 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 PRNDQ9UKY0 176 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 SDK1Q7Z5N4 2213 aa3.2□□□□□ -1.9
SKP1-213ENST00000524288 CACNA1DQ01668 2161 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 TNCP24821 2201 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 IGKV1D-17A0A075B6S4 117 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 TRAV3A0A0B4J244 114 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 TRBV6-1A0A0K0K1D8 114 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.19□□□□□ -1.9
SKP1-213ENST00000524288 FSTL3O95633 263 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 CECR9P0C854 216 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 C8orf88P0DMB2 117 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 RNASE2P10153 161 aaKnown RBP3.19□□□□□ -1.9
SKP1-213ENST00000524288 CRYBB3P26998 211 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 GNG10P50151 68 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 AESQ08117 197 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 SPINK9Q5DT21 86 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 GDF5OSQ5U4N7 250 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 EBLN2Q6P2I7 272 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 TCF24Q7RTU0 167 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 DOLPP1Q86YN1 238 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 DEFB125Q8N687 156 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 MRAP2Q96G30 205 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 RNASE7Q9H1E1 156 aaKnown RBP3.19□□□□□ -1.9
SKP1-213ENST00000524288 MS4A6AQ9H2W1 248 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 AMMECR1Q9Y4X0 333 aaPredicted RBP3.19□□□□□ -1.9
SKP1-213ENST00000524288 UNC80Q8N2C7 3258 aa3.19□□□□□ -1.9
SKP1-213ENST00000524288 CDH23Q9H251 3354 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 COL6A3P12111 3177 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 PRUNE2Q8WUY3 3088 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 XIRP2A4UGR9 3374 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 TRAV8-3A0A0A6YYJ7 113 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 IGHV3-43A0A0B4J1X8 118 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 C19orf71A6NCJ1 209 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 TAX1BP3O14907 124 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 SAA2P0DJI9 122 aaPredicted RBP3.18□□□□□ -1.9
SKP1-213ENST00000524288 SCGB1C2P0DMR2 95 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 HIST1H1EP10412 219 aaKnown RBP3.18□□□□□ -1.9
SKP1-213ENST00000524288 HBBP68871 147 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 BATFQ16520 125 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 DEFB109BQ30KR1 87 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 RPL39P5Q59GN2 51 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 UNQ5815/PRO19632Q6UWF5 114 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 SPATA12Q7Z6I5 190 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 NUP35Q8NFH5 326 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 OR4A5Q8NH83 315 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 PMCHL2Q9BQD1 86 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 FAM103A1Q9BTL3 118 aaKnown RBP3.18□□□□□ -1.9
SKP1-213ENST00000524288 TMEM70Q9BUB7 260 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 HEATR1Q9H583 2144 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms