RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 ACTR3CQ9C0K3 210 aaPredicted RBP7.94□□□□□ -1.14
SPARC-206ENST00000524277 EPDR1Q9UM22 224 aa7.94□□□□□ -1.14
SPARC-206ENST00000524277 TNFSF18Q9UNG2 199 aa7.94□□□□□ -1.14
SPARC-206ENST00000524277 HERC1Q15751 4861 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 A0A1W2PRE2 83 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 HMGB3O15347 200 aaKnown RBP7.93□□□□□ -1.14
SPARC-206ENST00000524277 ZNF80P51504 273 aaPredicted RBP7.93□□□□□ -1.14
SPARC-206ENST00000524277 TOR2AQ5JU69 321 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 ZNF506Q5JVG8 444 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 Q8N814 137 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 HSD17B11Q8NBQ5 300 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 SGK494Q96LW2 274 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 AQP10Q96PS8 301 aa7.93□□□□□ -1.14
SPARC-206ENST00000524277 NKX6-2Q9C056 277 aaPredicted RBP7.93□□□□□ -1.14
SPARC-206ENST00000524277 A0A087WWC5 75 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 TRAV8-3A0A0A6YYJ7 113 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 PGPEP1LA6NFU8 196 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 FABP5P3A8MUU1 101 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 IGLV2-11P01706 119 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 S100A4P26447 101 aaKnown RBP7.92□□□□□ -1.14
SPARC-206ENST00000524277 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 FGF8P55075 233 aaPredicted RBP7.92□□□□□ -1.14
SPARC-206ENST00000524277 DPPA3Q6W0C5 159 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 PRNTQ86SH4 94 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 C11orf21Q9P2W6 132 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 COX11Q9Y6N1 276 aa7.92□□□□□ -1.14
SPARC-206ENST00000524277 SRRM2Q9UQ35 2752 aaKnown RBP7.92□□□□□ -1.14
SPARC-206ENST00000524277 SEC11BP0C7V7 166 aa7.91□□□□□ -1.14
SPARC-206ENST00000524277 RNASE3P12724 160 aaKnown RBP7.91□□□□□ -1.14
SPARC-206ENST00000524277 Q9HAA7 133 aa7.91□□□□□ -1.14
SPARC-206ENST00000524277 IGHV3-73A0A0B4J1V6 119 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 GGTLC3B5MD39 225 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 IGHV3-30P01768 117 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 IGHV3-33P01772 117 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
SPARC-206ENST00000524277 IGHV3-30-3P0DP02 117 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 ASIPP42127 132 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 Q6ZSN1 163 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 INO80EQ8NBZ0 244 aaPredicted RBP7.9□□□□□ -1.14
SPARC-206ENST00000524277 MED28Q9H204 178 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 PARLQ9H300 379 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 IL36BQ9NZH7 164 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 ALG5Q9Y673 324 aa7.9□□□□□ -1.14
SPARC-206ENST00000524277 BORCS7-ASMTA0A0B4J1R7 106 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 RHODO00212 210 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 LGALSLQ3ZCW2 172 aaPredicted RBP7.89□□□□□ -1.15
SPARC-206ENST00000524277 DNLZQ5SXM8 178 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 HIST1H2BAQ96A08 127 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 RMI2Q96E14 147 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 DNAH8Q96JB1 4490 aa7.89□□□□□ -1.15
SPARC-206ENST00000524277 IGKV3D-20A0A0C4DH25 116 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 IFNA7P01567 189 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 LINC00694P0DN24 101 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 COX8CQ7Z4L0 72 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 LINC00479Q96M42 142 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 ZFP30Q9Y2G7 519 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
SPARC-206ENST00000524277 MYCBP2O75592 4640 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 FLG2Q5D862 2391 aaPredicted RBP7.87□□□□□ -1.15
SPARC-206ENST00000524277 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 B4DEV8 164 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 PTTG1O95997 202 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 GIPP09681 153 aaPredicted RBP7.87□□□□□ -1.15
SPARC-206ENST00000524277 GAGE1Q13065 139 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 GAGE4Q13068 117 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 GAGE5Q13069 117 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 GAGE13Q4V321 117 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 TCEAL7Q9BRU2 100 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 URGCP-MRPS24S4R325 110 aa7.87□□□□□ -1.15
SPARC-206ENST00000524277 PEX7O00628 323 aa7.86□□□□□ -1.15
SPARC-206ENST00000524277 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
SPARC-206ENST00000524277 ELOBQ15370 118 aa7.86□□□□□ -1.15
SPARC-206ENST00000524277 UFSP1Q6NVU6 142 aa7.86□□□□□ -1.15
SPARC-206ENST00000524277 OR11H4Q8NGC9 324 aa7.86□□□□□ -1.15
SPARC-206ENST00000524277 CHCHD7Q9BUK0 85 aa7.86□□□□□ -1.15
SPARC-206ENST00000524277 BATF3Q9NR55 127 aa7.86□□□□□ -1.15
SPARC-206ENST00000524277 TRAV34A0A0B4J273 112 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 KRBOX1C9JBD0 128 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 AKR1C8PQ5T2L2 129 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 FAM162BQ5T6X4 162 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 Q8N976 141 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 OR2T35Q8NGX2 323 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 PHLDA3Q9Y5J5 127 aa7.85□□□□□ -1.15
SPARC-206ENST00000524277 TRBV10-1A0A0K0K1A3 114 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 TRBV6-1A0A0K0K1D8 114 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 FAM74A7A6NL05 159 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 ARMS2P0C7Q2 107 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 FHITP49789 147 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 UBE2G1P62253 170 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 DMRTA1Q5VZB9 504 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 RPL7L1Q6DKI1 246 aaKnown RBP7.84□□□□□ -1.15
SPARC-206ENST00000524277 KCNIP4Q6PIL6 250 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 Q6ZSA8 131 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 DAZ4Q86SG3 579 aaKnown RBP7.84□□□□□ -1.15
SPARC-206ENST00000524277 Q86TA4 180 aa7.84□□□□□ -1.15
SPARC-206ENST00000524277 SFRP2Q96HF1 295 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms