RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 TMEM158Q8WZ71 300 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 CLUHP3Q96NS8 147 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
CTNNA1-236ENST00000522792 Q8N1Y9 231 aa11.32□□□□□ -0.6
CTNNA1-236ENST00000522792 M0R381 172 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 INSP01308 110 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 GTSCR1Q86UQ5 136 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 CBY3A6NI87 242 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 PRM2P04554 102 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 PDZD11Q5EBL8 140 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
CTNNA1-236ENST00000522792 IGHV3-16A0A0C4DH30 117 aa11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 CACNG7P62955 275 aa11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 DNLZQ5SXM8 178 aa11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-236ENST00000522792 HOXA5P20719 270 aa11.29□□□□□ -0.6
CTNNA1-236ENST00000522792 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
CTNNA1-236ENST00000522792 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
CTNNA1-236ENST00000522792 LINC01587Q99440 93 aa11.29□□□□□ -0.6
CTNNA1-236ENST00000522792 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 AMBPP02760 352 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 EVI2AP22794 236 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 TMEM256Q8N2U0 113 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
CTNNA1-236ENST00000522792 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
CTNNA1-236ENST00000522792 C1orf158Q8N1D5 194 aa11.27□□□□□ -0.61
CTNNA1-236ENST00000522792 C9orf85Q96MD7 179 aa11.27□□□□□ -0.61
CTNNA1-236ENST00000522792 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.61
CTNNA1-236ENST00000522792 GIG44P09565 113 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 HIST3H2BBQ8N257 126 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 C18orf32Q8TCD1 76 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 SMKR1H3BMG3 65 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 NUPR1O60356 82 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 Q0VG73 95 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
CTNNA1-236ENST00000522792 IFITM10A6NMD0 228 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 D6R8Y8 96 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 NCR2O95944 276 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 RAB4AP20338 218 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 LINC00310P59036 64 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 OXLD1Q5BKU9 147 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 OR10J3Q5JRS4 329 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 RCHY1Q96PM5 261 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 NOTCH3Q9UM47 2321 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 SERF1AO75920 110 aa11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 C14orf178Q8N769 122 aaPredicted RBP11.25□□□□□ -0.61
CTNNA1-236ENST00000522792 STAB1Q9NY15 2570 aa11.24□□□□□ -0.61
CTNNA1-236ENST00000522792 WIPF1O43516 503 aa11.24□□□□□ -0.61
CTNNA1-236ENST00000522792 NXPH4O95158 308 aa11.24□□□□□ -0.61
CTNNA1-236ENST00000522792 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-236ENST00000522792 MUC4Q99102 2169 aa11.24□□□□□ -0.61
CTNNA1-236ENST00000522792 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 S100A2P29034 98 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 CKS2P33552 79 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 JPT2Q9H910 190 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 AZU1P20160 251 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 AP1S3Q96PC3 154 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
CTNNA1-236ENST00000522792 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
CTNNA1-236ENST00000522792 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
CTNNA1-236ENST00000522792 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
CTNNA1-236ENST00000522792 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
CTNNA1-236ENST00000522792 U3KQK5 164 aa11.22□□□□□ -0.61
CTNNA1-236ENST00000522792 MGPP08493 103 aa11.21□□□□□ -0.61
CTNNA1-236ENST00000522792 FABP4P15090 132 aa11.21□□□□□ -0.61
CTNNA1-236ENST00000522792 C1QTNF4Q9BXJ3 329 aa11.21□□□□□ -0.61
CTNNA1-236ENST00000522792 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.61
CTNNA1-236ENST00000522792 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.62
CTNNA1-236ENST00000522792 ZNF876PQ49A33 203 aa11.21□□□□□ -0.62
CTNNA1-236ENST00000522792 C11orf72Q8NBR9 251 aa11.21□□□□□ -0.62
CTNNA1-236ENST00000522792 CSTL1Q9H114 145 aa11.21□□□□□ -0.62
CTNNA1-236ENST00000522792 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.62
CTNNA1-236ENST00000522792 A0A087WWL8 130 aa11.2□□□□□ -0.62
CTNNA1-236ENST00000522792 NPYP01303 97 aa11.2□□□□□ -0.62
CTNNA1-236ENST00000522792 RNASEKQ6P5S7 137 aaKnown RBP11.2□□□□□ -0.62
CTNNA1-236ENST00000522792 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
CTNNA1-236ENST00000522792 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
CTNNA1-236ENST00000522792 PYY3Q5JQD4 70 aa11.19□□□□□ -0.62
CTNNA1-236ENST00000522792 LOC389332A0A1B0GUA5 103 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms