RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MPV17L2Q567V2 206 aa5.37□□□□□ -1.55
TRAPPC9-212ENST00000521944 ZNF506Q5JVG8 444 aa5.37□□□□□ -1.55
TRAPPC9-212ENST00000521944 TMEM75Q8N9X5 138 aa5.37□□□□□ -1.55
TRAPPC9-212ENST00000521944 PRSS3P2Q8NHM4 247 aa5.37□□□□□ -1.55
TRAPPC9-212ENST00000521944 TVP23CQ96ET8 276 aa5.37□□□□□ -1.55
TRAPPC9-212ENST00000521944 hDV102S1A0JD36 115 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 TCRBP04435 133 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 ZNF664Q8N3J9 261 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 STPG4Q8N801 248 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 SMIM8Q96KF7 97 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 FAM167A-AS1Q96KT0 104 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 C9orf85Q96MD7 179 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 PARLQ9H300 379 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 JPT2Q9H910 190 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 PRR34Q9NV39 138 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 MGAT4CQ9UBM8 478 aa5.36□□□□□ -1.55
TRAPPC9-212ENST00000521944 TRAV26-2A0A0B4J265 109 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 PGPA6NDG6 321 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 NEDD8Q15843 81 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 MIAQ16674 131 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 GCSAMLQ5JQS6 135 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 Q6ZRP5 223 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 PTH2Q96A98 100 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 PRRT1Q99946 306 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 SLC25A2Q9BXI2 301 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 AAMDCQ9H7C9 122 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 EXTL2Q9UBQ6 330 aa5.35□□□□□ -1.55
TRAPPC9-212ENST00000521944 IGKV2-24A0A0C4DH68 120 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 RBAKDNA6NC62 111 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 FAM25AB3EWG3 89 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 FAM25CB3EWG5 89 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 FAM25GB3EWG6 89 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 SSSCA1O60232 199 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 AKAIN1P0CW23 69 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 ANXA3P12429 323 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 RNASE3P12724 160 aaKnown RBP5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 CAMLGP49069 296 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 SSBP1Q04837 148 aaKnown RBP5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 ZFP2Q6ZN57 461 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 Q6ZRG5 221 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 NRARPQ7Z6K4 114 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 CLVS1Q8IUQ0 354 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 OR10G7Q8NGN6 311 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 PHYHIPLQ96FC7 376 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 SDF2L1Q9HCN8 221 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 LENEPQ9Y5L5 61 aa5.34□□□□□ -1.55
TRAPPC9-212ENST00000521944 TMEM262E9PQX1 116 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 CRPP02741 224 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 ANGP03950 147 aaKnown RBP5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 NBEAP1P0C6P0 100 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 FGF8P55075 233 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 NCS1P62166 190 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 CACNG7P62955 275 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 OR1L4Q8NGR5 311 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 ASB13Q8WXK3 278 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 FXYD5Q96DB9 178 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 GGACTQ9BVM4 153 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 GPN1Q9HCN4 374 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 SLC39A9Q9NUM3 307 aa5.33□□□□□ -1.56
TRAPPC9-212ENST00000521944 A0A096LNI7 61 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 TRAV21A0A0B4J279 112 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 F6UZH7 168 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 NDUFS6O75380 124 aaKnown RBP5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 TMEM128Q5BJH2 165 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 SMIM4Q8WVI0 70 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 PFDN5Q99471 154 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 GFRA4Q9GZZ7 299 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 MIXL1Q9H2W2 232 aa5.32□□□□□ -1.56
TRAPPC9-212ENST00000521944 IGLV10-54A0A075B6I4 117 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 TRBV6-8A0A0A6YYG3 113 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 ANKRD20A5PA0PJZ0 165 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 MBPP02686 304 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 RPL29P47914 159 aaKnown RBP5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 ZNF80P51504 273 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 UBE2D3P61077 147 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 UBE2D2P62837 147 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 LINC00269Q8N2A0 174 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 C12orf45Q8N5I9 185 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 OR2G3Q8NGZ4 309 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 TMED6Q8WW62 240 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 KCNS1Q96KK3 526 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 SCGB3A2Q96PL1 93 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 ATP5SQ99766 215 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 WDR83OSQ9Y284 106 aa5.31□□□□□ -1.56
TRAPPC9-212ENST00000521944 TSC22D2O75157 780 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 SFT2D2O95562 160 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 SMIM18P0DKX4 95 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 VBP1P61758 197 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 RANP62826 216 aaKnown RBP5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 PPP1R1AQ13522 171 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 KCNIP4Q6PIL6 250 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 MIR17HGQ75NE6 70 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 INO80EQ8NBZ0 244 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 SCP2D1Q9UJQ7 156 aa5.3□□□□□ -1.56
TRAPPC9-212ENST00000521944 PIGBOS1A0A0B4J2F0 54 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms