RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PSCAO43653 123 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 OR7C2O60412 319 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
CSMD1-210ENST00000521646 HBG1P69891 147 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 HBG2P69892 147 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 TOR2AQ5JU69 321 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 FAM159AQ6UWV7 190 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 DAZ4Q86SG3 579 aaKnown RBP7.25□□□□□ -1.25
CSMD1-210ENST00000521646 WFDC1Q9HC57 220 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 DAZ3Q9NR90 486 aaKnown RBP7.25□□□□□ -1.25
CSMD1-210ENST00000521646 RPH3ALQ9UNE2 315 aa7.25□□□□□ -1.25
CSMD1-210ENST00000521646 PGPEP1LA6NFU8 196 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 CENPXA8MT69 81 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 RS1O15537 224 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 C1QBP02746 253 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 PVALBP20472 110 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-210ENST00000521646 PPT1P50897 306 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 H2BFSP57053 126 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 LRRC37A5PQ49AS3 106 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 LINC00299Q6ZSB3 139 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 GOLT1AQ6ZVE7 132 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 C9orf85Q96MD7 179 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 TNXBP22105 4242 aa7.24□□□□□ -1.25
CSMD1-210ENST00000521646 PGPA6NDG6 321 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 IGLV2-11P01706 119 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 RNASE3P12724 160 aaKnown RBP7.23□□□□□ -1.25
CSMD1-210ENST00000521646 OR10J3Q5JRS4 329 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 LELP1Q5T871 98 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 BAALCQ8WXS3 180 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 JPT2Q9H910 190 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 BATF3Q9NR55 127 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 LENEPQ9Y5L5 61 aa7.23□□□□□ -1.25
CSMD1-210ENST00000521646 FBLL1A6NHQ2 334 aaKnown RBP7.22□□□□□ -1.25
CSMD1-210ENST00000521646 HMGB3O15347 200 aaKnown RBP7.22□□□□□ -1.25
CSMD1-210ENST00000521646 IFITM3Q01628 133 aa7.22□□□□□ -1.25
CSMD1-210ENST00000521646 ZNF506Q5JVG8 444 aa7.22□□□□□ -1.25
CSMD1-210ENST00000521646 FFAR4Q5NUL3 377 aa7.22□□□□□ -1.25
CSMD1-210ENST00000521646 UFSP1Q6NVU6 142 aa7.22□□□□□ -1.25
CSMD1-210ENST00000521646 TMED6Q8WW62 240 aa7.22□□□□□ -1.25
CSMD1-210ENST00000521646 SAMD10Q9BYL1 202 aa7.22□□□□□ -1.25
CSMD1-210ENST00000521646 TRBV6-4A0A1B0GX49 114 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 CSN1S1P47710 185 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 RAB2AP61019 212 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 CNPY1Q3B7I2 92 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 ZNF876PQ49A33 203 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 CIRBP-AS1Q8TBR5 109 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 SMIM3Q9BZL3 60 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 GTSF1LQ9H1H1 148 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 TREM1Q9NP99 234 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 OTORQ9NRC9 128 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 MBD2Q9UBB5 411 aa7.21□□□□□ -1.26
CSMD1-210ENST00000521646 TRAV21A0A0B4J279 112 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 LAGE3Q14657 143 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 C14orf178Q8N769 122 aaPredicted RBP7.2□□□□□ -1.26
CSMD1-210ENST00000521646 ATP6V0E2Q8NHE4 81 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 DEFB104AQ8WTQ1 72 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 ASB13Q8WXK3 278 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 ATP5SQ99766 215 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 SDF2L1Q9HCN8 221 aa7.2□□□□□ -1.26
CSMD1-210ENST00000521646 TRAV8-6A0A0B4J262 113 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 IGKV3D-20A0A0C4DH25 116 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 GAGE12JA6NER3 117 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 PFN1P07737 140 aaKnown RBP7.19□□□□□ -1.26
CSMD1-210ENST00000521646 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 GAGE1Q13065 139 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 GAGE4Q13068 117 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 GAGE5Q13069 117 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 RHOHQ15669 191 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 KHDC3LQ587J8 217 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 SH2D6Q7Z4S9 175 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 DAZAP1Q96EP5 407 aaKnown RBP7.19□□□□□ -1.26
CSMD1-210ENST00000521646 NMES1Q9C002 83 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 PARLQ9H300 379 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 HSPB11Q9Y547 144 aa7.19□□□□□ -1.26
CSMD1-210ENST00000521646 PANO1I0J062 215 aa7.18□□□□□ -1.26
CSMD1-210ENST00000521646 PPP1R1CQ8WVI7 109 aa7.18□□□□□ -1.26
CSMD1-210ENST00000521646 LINC00479Q96M42 142 aa7.18□□□□□ -1.26
CSMD1-210ENST00000521646 CHAC1Q9BUX1 264 aa7.18□□□□□ -1.26
CSMD1-210ENST00000521646 FAM240BA0A1B0GVZ2 78 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 RNF222A6NCQ9 220 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 GGTLC3B5MD39 225 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 GCGP01275 180 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 FOXI1Q12951 378 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 ASAH1Q13510 395 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 OR2T35Q8NGX2 323 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 PRADC1Q9BSG0 188 aa7.17□□□□□ -1.26
CSMD1-210ENST00000521646 MPC2O95563 127 aa7.16□□□□□ -1.26
CSMD1-210ENST00000521646 TCRAP04437 139 aa7.16□□□□□ -1.26
CSMD1-210ENST00000521646 ARL14EPLP0DKL9 152 aa7.16□□□□□ -1.26
CSMD1-210ENST00000521646 SUN5Q8TC36 379 aa7.16□□□□□ -1.26
CSMD1-210ENST00000521646 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 MGST1P10620 155 aaKnown RBP7.15□□□□□ -1.26
CSMD1-210ENST00000521646 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 NIT1Q86X76 327 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 CMTM2Q8TAZ6 248 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 S100ZQ8WXG8 99 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 PTH2Q96A98 100 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
CSMD1-210ENST00000521646 CCDC32Q9BV29 185 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms