RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 UBE2G1P62253 170 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 DPPA3Q6W0C5 159 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 SUN5Q8TC36 379 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 A0A087WTM6 91 aa10.94□□□□□ -0.66
IGHV3-42-201ENST00000520410 IGLV2-11P01706 119 aa10.94□□□□□ -0.66
IGHV3-42-201ENST00000520410 ZNF726P1Q15940 193 aa10.94□□□□□ -0.66
IGHV3-42-201ENST00000520410 RGS21Q2M5E4 152 aa10.94□□□□□ -0.66
IGHV3-42-201ENST00000520410 C9orf85Q96MD7 179 aa10.94□□□□□ -0.66
IGHV3-42-201ENST00000520410 MAP1LC3B2A6NCE7 125 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 FABP5P3A8MUU1 101 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 B4DEV8 164 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 K7EP13 123 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 M0R036 132 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 CIDEAO60543 219 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 Q86TA4 180 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 Q8N1X5 172 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 MAP1LC3BQ9GZQ8 125 aa10.93□□□□□ -0.66
IGHV3-42-201ENST00000520410 TRBV6-4A0A1B0GX49 114 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 GAGE12JA6NER3 117 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 H3BVH4 76 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 MGST1P10620 155 aaKnown RBP10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 GAGE1Q13065 139 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 GAGE4Q13068 117 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 GAGE5Q13069 117 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 GAGE13Q4V321 117 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 CST9LP1Q5W188 147 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 CDPF1Q6NVV7 123 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 ATP6V0E2Q8NHE4 81 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 STOML3Q8TAV4 291 aa10.92□□□□□ -0.66
IGHV3-42-201ENST00000520410 FAM74A7A6NL05 159 aa10.91□□□□□ -0.66
IGHV3-42-201ENST00000520410 SMLR1H3BR10 107 aa10.91□□□□□ -0.66
IGHV3-42-201ENST00000520410 FAM74A4Q5TZK3 123 aa10.91□□□□□ -0.66
IGHV3-42-201ENST00000520410 SYT8Q8NBV8 401 aa10.91□□□□□ -0.66
IGHV3-42-201ENST00000520410 HIST1H2BAQ96A08 127 aa10.91□□□□□ -0.66
IGHV3-42-201ENST00000520410 TMSB15BA0A087X1C1 80 aa10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 A0A1B0GV50 99 aa10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 A8MWV9 139 aa10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 PARLQ9H300 379 aa10.9□□□□□ -0.66
IGHV3-42-201ENST00000520410 RYR1P21817 5038 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 AKR1C3P42330 323 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 TIRAPP58753 221 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 LELP1Q5T871 98 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 OR11H4Q8NGC9 324 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 GTSF1LQ9H1H1 148 aa10.89□□□□□ -0.67
IGHV3-42-201ENST00000520410 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 SH2D1AO60880 128 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 FMC1Q96HJ9 113 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 JPT2Q9H910 190 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
IGHV3-42-201ENST00000520410 EPM2AB3EWF7 344 aa10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 M0R381 172 aa10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 ARMS2P0C7Q2 107 aa10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 TPT1P13693 172 aaKnown RBP10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 FAM213BQ8TBF2 198 aa10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 PTH2Q96A98 100 aa10.87□□□□□ -0.67
IGHV3-42-201ENST00000520410 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
IGHV3-42-201ENST00000520410 PFDN1O60925 122 aa10.86□□□□□ -0.67
IGHV3-42-201ENST00000520410 GCSHP23434 173 aa10.86□□□□□ -0.67
IGHV3-42-201ENST00000520410 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
IGHV3-42-201ENST00000520410 IL36BQ9NZH7 164 aa10.86□□□□□ -0.67
IGHV3-42-201ENST00000520410 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
IGHV3-42-201ENST00000520410 A0A087WWL8 130 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 KRBOX1C9JBD0 128 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 PAGE4O60829 102 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 FHITP49789 147 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 Q6ZSN1 163 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 ZNF471Q9BX82 626 aaPredicted RBP10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 SAMD10Q9BYL1 202 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 CYTL1Q9NRR1 136 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 URGCP-MRPS24S4R325 110 aa10.85□□□□□ -0.67
IGHV3-42-201ENST00000520410 KANTRA0A1W2PQU2 76 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 G3V3Q6 166 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 RHODO00212 210 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 C14orf178Q8N769 122 aaPredicted RBP10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 FRZBQ92765 325 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 HSPG2P98160 4391 aa10.84□□□□□ -0.67
IGHV3-42-201ENST00000520410 CRIP1P50238 77 aa10.83□□□□□ -0.68
IGHV3-42-201ENST00000520410 HAMPP81172 84 aa10.83□□□□□ -0.68
IGHV3-42-201ENST00000520410 Q8N3U1 123 aa10.83□□□□□ -0.68
IGHV3-42-201ENST00000520410 TM2D2Q9BX73 214 aa10.83□□□□□ -0.68
IGHV3-42-201ENST00000520410 PRR27Q6MZM9 219 aa10.82□□□□□ -0.68
IGHV3-42-201ENST00000520410 KCNIP4Q6PIL6 250 aa10.82□□□□□ -0.68
IGHV3-42-201ENST00000520410 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
IGHV3-42-201ENST00000520410 TCEAL7Q9BRU2 100 aa10.82□□□□□ -0.68
IGHV3-42-201ENST00000520410 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
IGHV3-42-201ENST00000520410 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
IGHV3-42-201ENST00000520410 LTAP01374 205 aa10.81□□□□□ -0.68
IGHV3-42-201ENST00000520410 SMR3BP02814 79 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms