RNA–Protein interactions for RNA: ENST00000520371.5

CCNC-209, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-209ENST00000520371 DSCR9P59020 149 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 NAA38Q9BRA0 125 aaKnown RBP12.4□□□□□ -0.42
CCNC-209ENST00000520371 ATRXP46100 2492 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 NBASA2RRP1 2371 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 IGKV3-7A0A075B6H7 116 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 IGHV4OR15-8A0A075B7B6 117 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 A0A087WW49 117 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 DEFB1P60022 68 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
CCNC-209ENST00000520371 CSMD1Q96PZ7 3565 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 ODF3Q96PU9 254 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 CSTL1Q9H114 145 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 MYMXA0A1B0GTQ4 84 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 RNF223E7ERA6 249 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 BAALCQ8WXS3 180 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 HIST1H4GQ99525 98 aa12.39□□□□□ -0.43
CCNC-209ENST00000520371 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
CCNC-209ENST00000520371 Q6ZS46 218 aa12.38□□□□□ -0.43
CCNC-209ENST00000520371 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
CCNC-209ENST00000520371 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
CCNC-209ENST00000520371 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
CCNC-209ENST00000520371 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
CCNC-209ENST00000520371 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
CCNC-209ENST00000520371 E9PLD3 99 aa12.37□□□□□ -0.43
CCNC-209ENST00000520371 SPRY2O43597 315 aa12.37□□□□□ -0.43
CCNC-209ENST00000520371 LCNL1Q6ZST4 164 aa12.37□□□□□ -0.43
CCNC-209ENST00000520371 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
CCNC-209ENST00000520371 VCYO14598 125 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 PSMB8P28062 276 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 C21orf62-AS1Q17RA5 79 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 COL6A6A6NMZ7 2263 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 HIVEP3Q5T1R4 2406 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 PRSS29PA6NIE9 313 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 LINC00315P59091 139 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
CCNC-209ENST00000520371 SNRPD3P62318 126 aaKnown RBP12.35□□□□□ -0.43
CCNC-209ENST00000520371 TMEM141Q96I45 108 aa12.35□□□□□ -0.43
CCNC-209ENST00000520371 K7ERJ3 54 aa12.35□□□□□ -0.43
CCNC-209ENST00000520371 SRD5A1P18405 259 aa12.35□□□□□ -0.43
CCNC-209ENST00000520371 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
CCNC-209ENST00000520371 SPTBN1Q01082 2364 aaKnown RBP12.34□□□□□ -0.43
CCNC-209ENST00000520371 CD7P09564 240 aa12.34□□□□□ -0.43
CCNC-209ENST00000520371 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
CCNC-209ENST00000520371 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
CCNC-209ENST00000520371 IGLL5B9A064 214 aa12.33□□□□□ -0.44
CCNC-209ENST00000520371 G3V4G9 280 aa12.33□□□□□ -0.44
CCNC-209ENST00000520371 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
CCNC-209ENST00000520371 SCGB2A2Q13296 93 aa12.33□□□□□ -0.44
CCNC-209ENST00000520371 SUMO4Q6EEV6 95 aa12.33□□□□□ -0.44
CCNC-209ENST00000520371 ASH1LQ9NR48 2969 aaKnown RBP12.32□□□□□ -0.44
CCNC-209ENST00000520371 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 SAP30O75446 220 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 AVPP01185 164 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 HERVK_113P61574 105 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 COTL1Q14019 142 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 PRADC1Q9BSG0 188 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 A0A1B0GWB2 263 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 F5H697 171 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 J3QLI3 93 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 LGALS9O00182 355 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 FOXI2Q6ZQN5 318 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 LINC01356Q8N9X3 169 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 TP53TG1Q9Y2A0 90 aa12.32□□□□□ -0.44
CCNC-209ENST00000520371 A0A0J9YX75 114 aa12.31□□□□□ -0.44
CCNC-209ENST00000520371 TMEM238LA0A1B0GVL6 79 aa12.31□□□□□ -0.44
CCNC-209ENST00000520371 A6NJY4 79 aa12.31□□□□□ -0.44
CCNC-209ENST00000520371 PMVKQ15126 192 aa12.31□□□□□ -0.44
CCNC-209ENST00000520371 C9orf85Q96MD7 179 aa12.31□□□□□ -0.44
CCNC-209ENST00000520371 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
CCNC-209ENST00000520371 DUSP14O95147 198 aaKnown RBP12.3□□□□□ -0.44
CCNC-209ENST00000520371 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
CCNC-209ENST00000520371 IGHV3-16A0A0C4DH30 117 aa12.3□□□□□ -0.44
CCNC-209ENST00000520371 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
CCNC-209ENST00000520371 F8W1H4 67 aa12.3□□□□□ -0.44
CCNC-209ENST00000520371 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
CCNC-209ENST00000520371 DEFB112Q30KQ8 113 aa12.3□□□□□ -0.44
CCNC-209ENST00000520371 ZNF815PA8K554 130 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 K7EQG2 157 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 IGHV4-59P01825 116 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 ABCA2Q9BZC7 2435 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 A0A087WWL8 130 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 EDN2P20800 178 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 RRN3P1Q2M238 152 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 TMEM95Q3KNT9 176 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
CCNC-209ENST00000520371 CRYGDP07320 174 aa12.28□□□□□ -0.44
CCNC-209ENST00000520371 SCGB1D4Q6XE38 83 aa12.28□□□□□ -0.44
CCNC-209ENST00000520371 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
CCNC-209ENST00000520371 HOXA3O43365 443 aaPredicted RBP12.28□□□□□ -0.44
CCNC-209ENST00000520371 JPT2Q9H910 190 aa12.28□□□□□ -0.44
CCNC-209ENST00000520371 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.45
CCNC-209ENST00000520371 TSHBP01222 138 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms