RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 FAM231BA6NCW3 169 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 H3BRM9 83 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 K7EQM0 130 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 BUB3O43684 328 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 SPINK4O60575 86 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV4-30-4P0DP06 118 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 COX8AP10176 69 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 HIST1H1EP10412 219 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 MGST1P10620 155 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 PDE6HQ13956 83 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 GTF2H5Q6ZYL4 71 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 LINC00305Q7Z4B0 112 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 FAM167A-AS1Q96KT0 104 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 PRR25Q96S07 402 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 SHANK2-AS3Q9BTD1 123 aa4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 SLC25A39Q9BZJ4 359 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-220ENST00000520260 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 IGKV3-7A0A075B6H7 116 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 TRAV8-6A0A0B4J262 113 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 C9orf118A6NHY6 69 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 K7EP34 96 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 PEX7O00628 323 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 LEPROTL1O95214 131 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 SMIM17P0DL12 118 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 HBBP68871 147 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 PSG3Q16557 428 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 LINC01545Q5VT33 79 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 HIST2H2BDQ6DRA6 164 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 FOXI2Q6ZQN5 318 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 WFDC3Q8IUB2 231 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 FER1L6-AS1Q8NA97 138 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 OR10J6PQ8NGY7 276 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 GLMPQ8WWB7 406 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 NDFIP1Q9BT67 221 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 MAP1LC3CQ9BXW4 147 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 GFRA4Q9GZZ7 299 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 HSPB8Q9UJY1 196 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 TP53TG1Q9Y2A0 90 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 KLF12Q9Y4X4 402 aa4.23□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV3OR16-13A0A075B7E8 117 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV3OR16-8A0A075B7F1 116 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 A0A087X0K7 114 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV3-49A0A0A0MS15 119 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV3-74A0A0B4J1X5 117 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV1-24A0A0C4DH33 117 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 IGHV3-66A0A0C4DH42 116 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 SERTM2A0A1B0GWG4 89 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 A6NDN8 102 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 GAGE10A6NGK3 116 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 FBLL1A6NHQ2 334 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 A8MWL6 223 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 H3BRN7 92 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 SIVA1O15304 175 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 GATA2P23769 480 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 MLANAQ16655 118 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 TMEM97Q5BJF2 176 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 PSMG4Q5JS54 123 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 C2orf91Q6ZV80 131 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 NEGR1Q7Z3B1 354 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 LYPD1Q8N2G4 141 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 OR5A1Q8NGJ0 315 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 MRPL53Q96EL3 112 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 ZNF414Q96IQ9 312 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 SLC25A2Q9BXI2 301 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 RPP21Q9H633 154 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 TMEM14CQ9P0S9 112 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 U3KQE9 123 aa4.22□□□□□ -1.73
CTNNA1-220ENST00000520260 NOTCH1P46531 2555 aa4.21□□□□□ -1.73
CTNNA1-220ENST00000520260 IGKV1D-37A0A075B6S9 117 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 TRBV6-1A0A0K0K1D8 114 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 TMEM238LA0A1B0GVL6 79 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 A0A1B0GW15 77 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 C7orf71A4D174 169 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 TMEM189A5PLL7 270 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 C19orf71A6NCJ1 209 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 HIGD1CA8MV81 97 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 K7EIL1 84 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 K7EQG2 157 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 CA1P00915 261 aaPredicted RBP4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 ZNF688P0C7X2 276 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 FGF6P10767 208 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 DEFB131AP59861 70 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 KRTAP10-11P60412 298 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 UBE2L3P68036 154 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 HSD52Q0P140 79 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 CLUHP3Q96NS8 147 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 PAXXQ9BUH6 204 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 MLST8Q9BVC4 326 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 MAP6D1Q9H9H5 199 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 U3KQK5 164 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 SORL1Q92673 2214 aa4.21□□□□□ -1.74
CTNNA1-220ENST00000520260 PKD1L1Q8TDX9 2849 aa4.2□□□□□ -1.74
CTNNA1-220ENST00000520260 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms