RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 IGHV1OR15-1A0A075B7D0 117 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 LRCOL1A6NCL2 159 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 F6UZH7 168 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 K7EQD1 137 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 PDE6DO43924 150 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 HIST1H1EP10412 219 aaKnown RBP5.87□□□□□ -1.47
TRIM35-202ENST00000519219 GYPEP15421 78 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 MRPL23Q16540 153 aaKnown RBP5.87□□□□□ -1.47
TRIM35-202ENST00000519219 NEGR1Q7Z3B1 354 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 FAM167A-AS1Q96KT0 104 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 LINC00477Q96M19 166 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 TXNDC17Q9BRA2 123 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 TMEM14CQ9P0S9 112 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 ARL2-SNX15V9GYD0 113 aa5.87□□□□□ -1.47
TRIM35-202ENST00000519219 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 TRGV4A0A0C4DH28 118 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF415Q09FC8 603 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF674Q2M3X9 581 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 SVBPQ8N300 66 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 CYB561D1Q8N8Q1 229 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 SUN5Q8TC36 379 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 SEC11CQ9BY50 192 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 NKX6-2Q9C056 277 aaPredicted RBP5.86□□□□□ -1.47
TRIM35-202ENST00000519219 PRELID1Q9Y255 219 aa5.86□□□□□ -1.47
TRIM35-202ENST00000519219 IGLV5-52A0A0A0MRZ9 124 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 A0A1W2PRE2 83 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 FAM74A7A6NL05 159 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 TMEM250H0YL14 139 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 M0R036 132 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 CRYGDP07320 174 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 SRP19P09132 144 aaKnown RBP5.85□□□□□ -1.47
TRIM35-202ENST00000519219 SRIP30626 198 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 WFDC2Q14508 124 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 TMEM78Q5T7P6 136 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 Q6ZSN1 163 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 CMTM2Q8TAZ6 248 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 FXYD5Q96DB9 178 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 SMIM7Q9BQ49 75 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 AAMDCQ9H7C9 122 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 RPH3ALQ9UNE2 315 aa5.85□□□□□ -1.47
TRIM35-202ENST00000519219 IGHV3-16A0A0C4DH30 117 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF727A8MUV8 499 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 C9JQL5 133 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 SNAPINO95295 136 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 NBEAP1P0C6P0 100 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 ADCYAP1P18509 176 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 EVI2AP22794 236 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 ZNF138P52744 262 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 RANP62826 216 aaKnown RBP5.84□□□□□ -1.47
TRIM35-202ENST00000519219 PDE6HQ13956 83 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 TMEM183BQ1AE95 376 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 FAM74A3Q4VXF1 159 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 TMEM183AQ8IXX5 376 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 TCEAL7Q9BRU2 100 aa5.84□□□□□ -1.47
TRIM35-202ENST00000519219 CARHSP1Q9Y2V2 147 aaKnown RBP5.84□□□□□ -1.47
TRIM35-202ENST00000519219 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 TRAV9-2A0A087WT02 112 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 SCO2A0A1W2PP80 73 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 GGTLC3B5MD39 225 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 J3QL48 77 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 NDUFS6O75380 124 aaKnown RBP5.83□□□□□ -1.48
TRIM35-202ENST00000519219 AKR1C3P42330 323 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 CSN1S1P47710 185 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 UBE2G1P62253 170 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 SUMO1P63165 101 aaKnown RBP5.83□□□□□ -1.48
TRIM35-202ENST00000519219 SLAQ13239 276 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 Q8N3U1 123 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 TMEM70Q9BUB7 260 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 PARLQ9H300 379 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 Q9HAA7 133 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 OTORQ9NRC9 128 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 NAT8Q9UHE5 227 aa5.83□□□□□ -1.48
TRIM35-202ENST00000519219 PGPA6NDG6 321 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 K7EQM0 130 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 PEX7O00628 323 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 GNRH2O43555 120 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 ADIRFQ15847 76 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 Q8N814 137 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 C5orf17Q8NAS9 161 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 RASL10AQ92737 203 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 TVP23CQ96ET8 276 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 NAGKQ9UJ70 344 aa5.82□□□□□ -1.48
TRIM35-202ENST00000519219 TRAV4A0A0B4J268 109 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 IGHV3-38A0A0C4DH36 116 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 PSCAO43653 123 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 IGHV3-30P01768 117 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 IGHV3-33P01772 117 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 IGHV3-30-3P0DP02 117 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 IGHV3-30-5P0DP03 117 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 GNG4P50150 75 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 GNG5P63218 68 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 PNRC1Q12796 327 aaPredicted RBP5.81□□□□□ -1.48
TRIM35-202ENST00000519219 TMEM241Q24JQ0 296 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 LINC01620Q4KN68 170 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 C10orf91Q5T1B1 145 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 Q6AWC8 147 aa5.81□□□□□ -1.48
TRIM35-202ENST00000519219 NHLRC2Q8NBF2 726 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms