RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 C1orf196B1AJZ1 125 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 F6UB75 175 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 UBE2CO00762 179 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 SPRY2O43597 315 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 IGKV3-20P01619 116 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 RAB5BP61020 215 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 ANXA2RQ3ZCQ2 193 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 GDF5OSQ5U4N7 250 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 FAM159AQ6UWV7 190 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 Q6ZWC4 215 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 Q8TAT8 98 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 MUC7Q8TAX7 377 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 GTSF1Q8WW33 167 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 RNF183Q96D59 192 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 EDA2RQ9HAV5 297 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 SCRT2Q9NQ03 307 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 URGCP-MRPS24S4R325 110 aa5.52□□□□□ -1.53
SDCBP-206ENST00000519115 TGIF2-C20orf24A0A0A6YYL0 155 aa5.51□□□□□ -1.53
SDCBP-206ENST00000519115 IGKV3D-20A0A0C4DH25 116 aa5.51□□□□□ -1.53
SDCBP-206ENST00000519115 GIG44P09565 113 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-206ENST00000519115 RNASE4P34096 147 aaKnown RBP5.51□□□□□ -1.53
SDCBP-206ENST00000519115 RPS10P46783 165 aaKnown RBP5.51□□□□□ -1.53
SDCBP-206ENST00000519115 FXYD7P58549 80 aa5.51□□□□□ -1.53
SDCBP-206ENST00000519115 HBBP68871 147 aa5.51□□□□□ -1.53
SDCBP-206ENST00000519115 FER1L6-AS1Q8NA97 138 aa5.51□□□□□ -1.53
SDCBP-206ENST00000519115 TP53TG1Q9Y2A0 90 aa5.51□□□□□ -1.53
SDCBP-206ENST00000519115 TRGV11A0A075B6L2 103 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 IGHV1OR15-1A0A075B7D0 117 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 A0A0J9YWU9 116 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 PHOX2AO14813 284 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 CRXO43186 299 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-206ENST00000519115 PPBPP02775 128 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 ZNF705DP0CH99 300 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-206ENST00000519115 ZNF705BP0CI00 300 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-206ENST00000519115 ASIPP42127 132 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 COA6Q5JTJ3 125 aaKnown RBP5.5□□□□□ -1.53
SDCBP-206ENST00000519115 GFI1BQ5VTD9 330 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 ZFAND6Q6FIF0 208 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 OR11H2Q8NH07 326 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 SPXQ9BT56 116 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 TMEM191AQ9H0A3 160 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 XCL2Q9UBD3 114 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 TRAPPC1Q9Y5R8 145 aa5.5□□□□□ -1.53
SDCBP-206ENST00000519115 SMIM9A6NGZ8 99 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 DEFB4AO15263 64 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 CIDEAO60543 219 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 NXPH4O95158 308 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 INSP01308 110 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 LYZL1Q6UWQ5 148 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 TMEM136Q6ZRR5 245 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 SMIM15Q7Z3B0 74 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 C11orf21Q9P2W6 132 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 LAMTOR2Q9Y2Q5 125 aa5.49□□□□□ -1.53
SDCBP-206ENST00000519115 TRAV12-3A0A0B4J271 114 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 C3orf84H3BNL1 204 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 PPP1R17O96001 155 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 TRGC2P03986 189 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 ARMS2P0C7Q2 107 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 TRGC1P0CF51 173 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 NTF3P20783 257 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 S100A4P26447 101 aaKnown RBP5.48□□□□□ -1.53
SDCBP-206ENST00000519115 Q0VG73 95 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 OR10J3Q5JRS4 329 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 PRR9Q5T870 116 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 PGLYRP4Q96LB8 373 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 C9orf85Q96MD7 179 aa5.48□□□□□ -1.53
SDCBP-206ENST00000519115 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 IGHV3OR16-12A0A075B7B8 117 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 IGHV3-16A0A0C4DH30 117 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 PRSS47A8MTI9 375 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 M0R2Z0 102 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 APCSP02743 223 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 RNASE3P12724 160 aaKnown RBP5.47□□□□□ -1.53
SDCBP-206ENST00000519115 SPINK13Q1W4C9 94 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 LGALS9BQ3B8N2 356 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 ZFP82Q8N141 532 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 POM121L12Q8N7R1 296 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 SYT8Q8NBV8 401 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 CSNK1G2-AS1Q8NCQ2 148 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-206ENST00000519115 GOLT1BQ9Y3E0 138 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 PHLDA3Q9Y5J5 127 aa5.47□□□□□ -1.53
SDCBP-206ENST00000519115 EPPK1P58107 5090 aaKnown RBP5.46□□□□□ -1.53
SDCBP-206ENST00000519115 TENM2Q9NT68 2774 aa5.46□□□□□ -1.53
SDCBP-206ENST00000519115 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 SNURFLB1AK76 121 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BKO60814 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BJP06899 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BOP23527 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BBP33778 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 TCL1AP56279 114 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BDP58876 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BCP62807 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 DAZ2Q13117 558 aaKnown RBP5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST2H2BEQ16778 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 C21orf62-AS1Q17RA5 79 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms