RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 DMBT1Q9UGM3 2413 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-213ENST00000519113 RBAKDNA6NC62 111 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 EPM2AB3EWF7 344 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 M0R2Z0 102 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 BTF3P20290 206 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 KRTAP10-2P60368 255 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 ELOBQ15370 118 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 IBA57Q5T440 356 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 MLST8Q9BVC4 326 aa13.22□□□□□ -0.29
CTNNA1-213ENST00000519113 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 SAPCD1Q5SSQ6 148 aa13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 PRR27Q6MZM9 219 aa13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 FAM231DQ6ZW35 169 aa13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 ZNF738Q8NE65 137 aa13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 RNASE7Q9H1E1 156 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 ZNF492Q9P255 531 aa13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 TMA7Q9Y2S6 64 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-213ENST00000519113 PLAC8L1A1L4L8 177 aa13.2□□□□□ -0.3
CTNNA1-213ENST00000519113 GATCO43716 136 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-213ENST00000519113 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-213ENST00000519113 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-213ENST00000519113 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
CTNNA1-213ENST00000519113 TGIF2-C20orf24A0A0A6YYL0 155 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 PRAC2D3DTV9 90 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 AZU1P20160 251 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 RAB5AP20339 215 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 TMEM256Q8N2U0 113 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 LINC01587Q99440 93 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 VGLL1Q99990 258 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 IL36BQ9NZH7 164 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 V9GYV3 84 aa13.19□□□□□ -0.3
CTNNA1-213ENST00000519113 A0A1W2PPQ1 181 aa13.18□□□□□ -0.3
CTNNA1-213ENST00000519113 CT45A10P0DMU9 189 aa13.18□□□□□ -0.3
CTNNA1-213ENST00000519113 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
CTNNA1-213ENST00000519113 NUDT11Q96G61 164 aa13.18□□□□□ -0.3
CTNNA1-213ENST00000519113 BTF3L4Q96K17 158 aa13.18□□□□□ -0.3
CTNNA1-213ENST00000519113 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-213ENST00000519113 TRBV24-1A0A075B6N3 115 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 CXCL1P09341 107 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 ERCC8Q13216 396 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 TMEM78Q5T7P6 136 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 C16orf74Q96GX8 76 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 KRTAP1-5Q9BYS1 174 aa13.17□□□□□ -0.3
CTNNA1-213ENST00000519113 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
CTNNA1-213ENST00000519113 P01737 135 aa13.16□□□□□ -0.3
CTNNA1-213ENST00000519113 C9orf47Q6ZRZ4 202 aa13.16□□□□□ -0.3
CTNNA1-213ENST00000519113 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
CTNNA1-213ENST00000519113 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
CTNNA1-213ENST00000519113 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 C19orf71A6NCJ1 209 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 HTN1P15515 57 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 ZNF138P52744 262 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 ZNF493Q6ZR52 646 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 COX8CQ7Z4L0 72 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 Q8TAT8 98 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 PYGO2Q9BRQ0 406 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 AGPAT4-IT1Q9H0P7 198 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 RPP21Q9H633 154 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
CTNNA1-213ENST00000519113 RPS10P46783 165 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-213ENST00000519113 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
CTNNA1-213ENST00000519113 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
CTNNA1-213ENST00000519113 TRAV26-1A0A087WT03 109 aa13.13□□□□□ -0.31
CTNNA1-213ENST00000519113 RPL19P84098 196 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-213ENST00000519113 CT83Q5H943 113 aa13.13□□□□□ -0.31
CTNNA1-213ENST00000519113 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
CTNNA1-213ENST00000519113 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-213ENST00000519113 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
CTNNA1-213ENST00000519113 SMIM27A0A1W2PRY6 76 aa13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 A8MWL6 223 aa13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 C1orf196B1AJZ1 125 aa13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 HIST1H1AQ02539 215 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
CTNNA1-213ENST00000519113 ESRGQ1W209 222 aa13.11□□□□□ -0.31
CTNNA1-213ENST00000519113 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
CTNNA1-213ENST00000519113 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-213ENST00000519113 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-213ENST00000519113 LENEPQ9Y5L5 61 aa13.11□□□□□ -0.31
CTNNA1-213ENST00000519113 SH2D1AO60880 128 aa13.1□□□□□ -0.31
CTNNA1-213ENST00000519113 TYMSP04818 313 aa13.1□□□□□ -0.31
CTNNA1-213ENST00000519113 CRIP1P50238 77 aa13.1□□□□□ -0.31
CTNNA1-213ENST00000519113 TCL1AP56279 114 aa13.1□□□□□ -0.31
CTNNA1-213ENST00000519113 RNASE8Q8TDE3 154 aaKnown RBP13.1□□□□□ -0.31
CTNNA1-213ENST00000519113 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
CTNNA1-213ENST00000519113 A0A0J9YY99 117 aa13.09□□□□□ -0.31
CTNNA1-213ENST00000519113 FABP5P3A8MUU1 101 aa13.09□□□□□ -0.31
CTNNA1-213ENST00000519113 H3BNG1 76 aa13.09□□□□□ -0.31
CTNNA1-213ENST00000519113 EREGO14944 169 aa13.09□□□□□ -0.31
CTNNA1-213ENST00000519113 FAT1Q14517 4588 aa13.08□□□□□ -0.31
CTNNA1-213ENST00000519113 CDKN1BP46527 198 aa13.08□□□□□ -0.32
CTNNA1-213ENST00000519113 RAB5BP61020 215 aa13.08□□□□□ -0.32
CTNNA1-213ENST00000519113 FRZBQ92765 325 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms