RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 PGPEP1LA6NFU8 196 aa20.23■□□□□ 0.83
SYNPO-203ENST00000518872 KANTRA0A1W2PQU2 76 aa20.22■□□□□ 0.83
SYNPO-203ENST00000518872 DNLZQ5SXM8 178 aa20.22■□□□□ 0.83
SYNPO-203ENST00000518872 ZNF471Q9BX82 626 aaPredicted RBP20.22■□□□□ 0.83
SYNPO-203ENST00000518872 LY96Q9Y6Y9 160 aa20.22■□□□□ 0.83
SYNPO-203ENST00000518872 LOC100131303A0A0U1RQF7 123 aa20.21■□□□□ 0.83
SYNPO-203ENST00000518872 EIF5AP63241 154 aaKnown RBP20.21■□□□□ 0.83
SYNPO-203ENST00000518872 RHOHQ15669 191 aa20.21■□□□□ 0.83
SYNPO-203ENST00000518872 SLC25A29Q8N8R3 303 aa20.21■□□□□ 0.83
SYNPO-203ENST00000518872 ZC2HC1AQ96GY0 325 aa20.21■□□□□ 0.83
SYNPO-203ENST00000518872 IL36BQ9NZH7 164 aa20.21■□□□□ 0.83
SYNPO-203ENST00000518872 TRAV9-2A0A087WT02 112 aa20.2■□□□□ 0.82
SYNPO-203ENST00000518872 C16orf90A8MZG2 172 aa20.2■□□□□ 0.82
SYNPO-203ENST00000518872 DNAH10OSP0CZ25 163 aa20.2■□□□□ 0.82
SYNPO-203ENST00000518872 CRIP1P50238 77 aa20.2■□□□□ 0.82
SYNPO-203ENST00000518872 UBE2G1P62253 170 aa20.2■□□□□ 0.82
SYNPO-203ENST00000518872 KRTAP17-1Q9BYP8 105 aa20.2■□□□□ 0.82
SYNPO-203ENST00000518872 S100A4P26447 101 aaKnown RBP20.19■□□□□ 0.82
SYNPO-203ENST00000518872 ASIPP42127 132 aa20.19■□□□□ 0.82
SYNPO-203ENST00000518872 CST9LP1Q5W188 147 aa20.19■□□□□ 0.82
SYNPO-203ENST00000518872 WFDC10BQ8IUB3 73 aa20.19■□□□□ 0.82
SYNPO-203ENST00000518872 PRADC1Q9BSG0 188 aa20.19■□□□□ 0.82
SYNPO-203ENST00000518872 LTAP01374 205 aa20.18■□□□□ 0.82
SYNPO-203ENST00000518872 MGST1P10620 155 aaKnown RBP20.18■□□□□ 0.82
SYNPO-203ENST00000518872 ZFP2Q6ZN57 461 aa20.18■□□□□ 0.82
SYNPO-203ENST00000518872 FAM213BQ8TBF2 198 aa20.18■□□□□ 0.82
SYNPO-203ENST00000518872 SFT2D1Q8WV19 159 aa20.18■□□□□ 0.82
SYNPO-203ENST00000518872 LRP1BQ9NZR2 4599 aa20.17■□□□□ 0.82
SYNPO-203ENST00000518872 A8MWV9 139 aa20.17■□□□□ 0.82
SYNPO-203ENST00000518872 B4DEV8 164 aa20.17■□□□□ 0.82
SYNPO-203ENST00000518872 FAM162BQ5T6X4 162 aa20.17■□□□□ 0.82
SYNPO-203ENST00000518872 NFE4Q86UQ8 179 aa20.17■□□□□ 0.82
SYNPO-203ENST00000518872 NHLRC2Q8NBF2 726 aa20.17■□□□□ 0.82
SYNPO-203ENST00000518872 KRBOX1C9JBD0 128 aa20.16■□□□□ 0.82
SYNPO-203ENST00000518872 PAGE4O60829 102 aa20.16■□□□□ 0.82
SYNPO-203ENST00000518872 ZNF674Q2M3X9 581 aa20.16■□□□□ 0.82
SYNPO-203ENST00000518872 BOLA1Q9Y3E2 137 aa20.16■□□□□ 0.82
SYNPO-203ENST00000518872 RYR1P21817 5038 aa20.16■□□□□ 0.82
SYNPO-203ENST00000518872 SH2D1AO60880 128 aa20.15■□□□□ 0.82
SYNPO-203ENST00000518872 EVI2AP22794 236 aa20.15■□□□□ 0.82
SYNPO-203ENST00000518872 AKR1C3P42330 323 aa20.15■□□□□ 0.82
SYNPO-203ENST00000518872 LGALSLQ3ZCW2 172 aaPredicted RBP20.15■□□□□ 0.82
SYNPO-203ENST00000518872 SPATA12Q7Z6I5 190 aa20.15■□□□□ 0.82
SYNPO-203ENST00000518872 PARLQ9H300 379 aa20.15■□□□□ 0.82
SYNPO-203ENST00000518872 TPT1P13693 172 aaKnown RBP20.14■□□□□ 0.81
SYNPO-203ENST00000518872 TMUB2Q71RG4 321 aa20.14■□□□□ 0.81
SYNPO-203ENST00000518872 S100A9P06702 114 aaKnown RBP20.13■□□□□ 0.81
SYNPO-203ENST00000518872 LINC01559Q495D7 138 aa20.13■□□□□ 0.81
SYNPO-203ENST00000518872 C10orf126Q8N4M7 172 aa20.13■□□□□ 0.81
SYNPO-203ENST00000518872 IGHV3-73A0A0B4J1V6 119 aa20.12■□□□□ 0.81
SYNPO-203ENST00000518872 CDK2AP2O75956 126 aa20.12■□□□□ 0.81
SYNPO-203ENST00000518872 H3BVH4 76 aa20.11■□□□□ 0.81
SYNPO-203ENST00000518872 PFDN1O60925 122 aa20.11■□□□□ 0.81
SYNPO-203ENST00000518872 H2AFB1P0C5Y9 115 aa20.11■□□□□ 0.81
SYNPO-203ENST00000518872 SCRT2Q9NQ03 307 aa20.11■□□□□ 0.81
SYNPO-203ENST00000518872 M0R036 132 aa20.1■□□□□ 0.81
SYNPO-203ENST00000518872 ARMS2P0C7Q2 107 aa20.1■□□□□ 0.81
SYNPO-203ENST00000518872 UFSP1Q6NVU6 142 aa20.1■□□□□ 0.81
SYNPO-203ENST00000518872 MSRB1Q9NZV6 116 aa20.1■□□□□ 0.81
SYNPO-203ENST00000518872 IGHV3-38A0A0C4DH36 116 aa20.09■□□□□ 0.81
SYNPO-203ENST00000518872 KRTAP10-2P60368 255 aa20.09■□□□□ 0.81
SYNPO-203ENST00000518872 LINC01556Q5JQF7 62 aa20.09■□□□□ 0.81
SYNPO-203ENST00000518872 SYT8Q8NBV8 401 aa20.09■□□□□ 0.81
SYNPO-203ENST00000518872 TNFRSF18Q9Y5U5 241 aa20.09■□□□□ 0.81
SYNPO-203ENST00000518872 DMRTA1Q5VZB9 504 aa20.08■□□□□ 0.81
SYNPO-203ENST00000518872 RHODO00212 210 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 CRYGDP07320 174 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 LINC00694P0DN24 101 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 LELP1Q5T871 98 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 Q6ZSN1 163 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 TCTE3Q8IZS6 198 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 MLST8Q9BVC4 326 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 GTSF1LQ9H1H1 148 aa20.07■□□□□ 0.8
SYNPO-203ENST00000518872 TRAV1-1A0A0B4J248 108 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 TRAV8-6A0A0B4J262 113 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 A0A1B0GV50 99 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 SCO2A0A1W2PP80 73 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 RAB5CP51148 216 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 ERVFC1-1P60608 527 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 ATP6V0E2Q8NHE4 81 aa20.06■□□□□ 0.8
SYNPO-203ENST00000518872 GRIFINA4D1Z8 144 aa20.05■□□□□ 0.8
SYNPO-203ENST00000518872 EIF5AL1Q6IS14 154 aaKnown RBP20.05■□□□□ 0.8
SYNPO-203ENST00000518872 JPT2Q9H910 190 aa20.05■□□□□ 0.8
SYNPO-203ENST00000518872 HSPG2P98160 4391 aa20.05■□□□□ 0.8
SYNPO-203ENST00000518872 DNAH5Q8TE73 4624 aa20.05■□□□□ 0.8
SYNPO-203ENST00000518872 CXCL1P09341 107 aa20.04■□□□□ 0.8
SYNPO-203ENST00000518872 SAMD10Q9BYL1 202 aa20.04■□□□□ 0.8
SYNPO-203ENST00000518872 PHLDA3Q9Y5J5 127 aa20.04■□□□□ 0.8
SYNPO-203ENST00000518872 EREGO14944 169 aa20.03■□□□□ 0.8
SYNPO-203ENST00000518872 SFRP2Q96HF1 295 aa20.03■□□□□ 0.8
SYNPO-203ENST00000518872 MANBALQ9NQG1 85 aa20.03■□□□□ 0.8
SYNPO-203ENST00000518872 OR10J3Q5JRS4 329 aa20.02■□□□□ 0.8
SYNPO-203ENST00000518872 BAGE2Q86Y30 109 aa20.02■□□□□ 0.8
SYNPO-203ENST00000518872 ZFP82Q8N141 532 aa20.01■□□□□ 0.79
SYNPO-203ENST00000518872 PGPEP1Q9NXJ5 209 aa20.01■□□□□ 0.79
SYNPO-203ENST00000518872 PCLOQ9Y6V0 5065 aa20■□□□□ 0.79
SYNPO-203ENST00000518872 TMSB15BA0A087X1C1 80 aa20■□□□□ 0.79
SYNPO-203ENST00000518872 CDPF1Q6NVV7 123 aa20■□□□□ 0.79
SYNPO-203ENST00000518872 C11orf52Q96A22 123 aa20■□□□□ 0.79
SYNPO-203ENST00000518872 A0A087WTM6 91 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms