RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 HIST1H2BNQ99877 126 aa7.39□□□□□ -1.23
HMBOX1-205ENST00000518080 HIST1H2BMQ99879 126 aa7.39□□□□□ -1.23
HMBOX1-205ENST00000518080 NIPBLQ6KC79 2804 aaeCLIP7.39□□□□□ -1.23
HMBOX1-205ENST00000518080 GNRH2O43555 120 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 SNAI2O43623 268 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 ZNF324O75467 553 aaPredicted RBP7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 NTF3P20783 257 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 SRIP30626 198 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 ZNF415Q09FC8 603 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 SLAQ13239 276 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 KIAA1644Q3SXP7 199 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 DEFB125Q8N687 156 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 SYT8Q8NBV8 401 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 WFDC9Q8NEX5 89 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 AP1S3Q96PC3 154 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 GOLT1BQ9Y3E0 138 aa7.38□□□□□ -1.23
HMBOX1-205ENST00000518080 CRXO43186 299 aaPredicted RBP7.37□□□□□ -1.23
HMBOX1-205ENST00000518080 SMIM17P0DL12 118 aa7.37□□□□□ -1.23
HMBOX1-205ENST00000518080 TDRG1Q3Y452 100 aa7.37□□□□□ -1.23
HMBOX1-205ENST00000518080 Q8N1Y9 231 aa7.37□□□□□ -1.23
HMBOX1-205ENST00000518080 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
HMBOX1-205ENST00000518080 ZMAT5Q9UDW3 170 aaKnown RBP7.37□□□□□ -1.23
HMBOX1-205ENST00000518080 LOC102724200A0A096LPH7 203 aaPredicted RBP7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 IGHV3-16A0A0C4DH30 117 aa7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 S100A2P29034 98 aa7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 BAGE3Q86Y29 109 aa7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 C19orf73Q9NVV2 129 aa7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 TP53TG3Q9ULZ0 132 aa7.36□□□□□ -1.23
HMBOX1-205ENST00000518080 PHOX2AO14813 284 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 MGPP08493 103 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 RBMY1A1P0DJD3 496 aaKnown RBP7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 RBMY1CP0DJD4 496 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 APOC4P55056 127 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 SNRPEP62304 92 aaKnown RBP7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 RBMY1FQ15415 496 aaKnown RBP7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 ZNF493Q6ZR52 646 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 AMN1Q8IY45 258 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 GATD1Q8NB37 220 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 TMEM191AQ9H0A3 160 aa7.35□□□□□ -1.23
HMBOX1-205ENST00000518080 TENM1Q9UKZ4 2725 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 CKS2P33552 79 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 FAM104BQ5XKR9 115 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 ORMDL3Q8N138 153 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 C9orf85Q96MD7 179 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 RCHY1Q96PM5 261 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 LINC00467Q9BRT7 94 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 MSRB1Q9NZV6 116 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 MUC4Q99102 2169 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 NOTCH3Q9UM47 2321 aa7.34□□□□□ -1.23
HMBOX1-205ENST00000518080 IGHV4-4A0A075B6R2 117 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 D6R8Y8 96 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 PDZD11Q5EBL8 140 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 OR10J3Q5JRS4 329 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 SCRT2Q9NQ03 307 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 MDFICQ9P1T7 246 aa7.33□□□□□ -1.24
HMBOX1-205ENST00000518080 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 SPRY2O43597 315 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 NXPH4O95158 308 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 NCR2O95944 276 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 PPBPP02775 128 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 EVI2AP22794 236 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 AKR1D1P51857 326 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 ZNF876PQ49A33 203 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 RNASEKQ6P5S7 137 aaKnown RBP7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 ZNF575Q86XF7 245 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 TMEM263Q8WUH6 116 aaKnown RBP7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 C16orf74Q96GX8 76 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 PRELID3AQ96N28 172 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 ALKBH7Q9BT30 221 aaPredicted RBP7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 SPXQ9BT56 116 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 GSN-AS1Q9NRJ2 163 aa7.32□□□□□ -1.24
HMBOX1-205ENST00000518080 KIR2DL5BA0A0G2JN68 375 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 KIR2DL5BA0A0G2JPC4 375 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 M0R2P5 195 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 UBE2CO00762 179 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 Q0VG73 95 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 ZNF56Q15929 161 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 IQCJQ1A5X6 159 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 RRN3P1Q2M238 152 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 MRPL51Q4U2R6 128 aaKnown RBP7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 FAM74A4Q5TZK3 123 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 KIR2DL5AQ8N109 375 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 C18orf32Q8TCD1 76 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 MRAP2Q96G30 205 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 SAMD10Q9BYL1 202 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 MAP1LC3AQ9H492 121 aa7.31□□□□□ -1.24
HMBOX1-205ENST00000518080 F5H697 171 aa7.3□□□□□ -1.24
HMBOX1-205ENST00000518080 SMKR1H3BMG3 65 aa7.3□□□□□ -1.24
HMBOX1-205ENST00000518080 SERF1AO75920 110 aa7.3□□□□□ -1.24
HMBOX1-205ENST00000518080 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
HMBOX1-205ENST00000518080 TMEM18Q96B42 140 aa7.3□□□□□ -1.24
HMBOX1-205ENST00000518080 MRPL16Q9NX20 251 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms