RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 LYRM2Q9NU23 88 aaPredicted RBP5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
TNFRSF11B-202ENST00000517352 APOBP04114 4563 aaKnown RBP5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KLLNB2CW77 178 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 M0QXV9 152 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LYRM1O43325 122 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 IL7P13232 177 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TAS2R45P59539 299 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 UBE2L3P68036 154 aaKnown RBP5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C9orf47Q6ZRZ4 202 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TMEM252Q8N6L7 170 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 C11orf72Q8NBR9 251 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 OR5C1Q8NGR4 320 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 Q8TAT8 98 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 THAP6Q8TBB0 222 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SH3BGRL3Q9H299 93 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 Q9HAA7 133 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 ZNF492Q9P255 531 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TP53TG3Q9ULZ0 132 aa5.04□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NACAE9PAV3 2078 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 A0A1B0GV72 72 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 B5MCH6 92 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 K7EQD1 137 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PFDN1O60925 122 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 TCRBP04435 133 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PFN1P07737 140 aaKnown RBP5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SFTA3P0C7M3 94 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 DNAH10OSP0CZ25 163 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 CRISP2P16562 243 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 FHL2Q14192 279 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 LRRC37A5PQ49AS3 106 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 Q6ZSN1 163 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 MIR17HGQ75NE6 70 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SEC22CQ9BRL7 303 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 PRADC1Q9BSG0 188 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NDFIP1Q9BT67 221 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 NPCDR1Q9BY65 106 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 SDF2L1Q9HCN8 221 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 HERC1Q15751 4861 aa5.03□□□□□ -1.6
TNFRSF11B-202ENST00000517352 IGHV3-38A0A0C4DH36 116 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGSF23A1L1A6 192 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 F5H697 171 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 NDUFB4O95168 129 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 KHDC3LQ587J8 217 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 GCSAMLQ5JQS6 135 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 WFDC10BQ8IUB3 73 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 KCNS1Q96KK3 526 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 TM2D2Q9BX73 214 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 SLC25A2Q9BXI2 301 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 MDFICQ9P1T7 246 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 V9GYY9 64 aa5.02□□□□□ -1.61
TNFRSF11B-202ENST00000517352 DMBT1Q9UGM3 2413 aaPredicted RBP5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 TRAV21A0A0B4J279 112 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGHV3-16A0A0C4DH30 117 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 TRBV7-9A0A0J9YWB2 115 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 M0R2P5 195 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 PLA2G1BP04054 148 aaKnown RBP5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 CYCSP99999 105 aaKnown RBP5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 NHLH2Q02577 135 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ZNF266Q14584 549 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ZFP69Q49AA0 526 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 FFAR4Q5NUL3 377 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ZFAND2AQ8N6M9 145 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 OR10G4Q8NGN3 311 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 NTN5Q8WTR8 489 aaPredicted RBP5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ISOC2Q96AB3 205 aa5.01□□□□□ -1.61
TNFRSF11B-202ENST00000517352 TRAV4A0A0B4J268 109 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 RBAKDNA6NC62 111 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 PGPA6NDG6 321 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 TRIAP1O43715 76 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 SSNA1O43805 119 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGHV3-30P01768 117 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGHV3-33P01772 117 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGHV3-30-3P0DP02 117 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGHV3-30-5P0DP03 117 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 XGP55808 180 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ZNF876PQ49A33 203 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ASB13Q8WXK3 278 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 RASL10AQ92737 203 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 PHYHIPLQ96FC7 376 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 FAM19A4Q96LR4 140 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 LENEPQ9Y5L5 61 aa5□□□□□ -1.61
TNFRSF11B-202ENST00000517352 IGHV3-73A0A0B4J1V6 119 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 DIRC3C9JPN6 131 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 GNRH2O43555 120 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 LINC00614P0C842 121 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 S100A4P26447 101 aaKnown RBP4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 BTCP35070 178 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 RPL13AP40429 203 aaKnown RBP4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 SUMO2P61956 95 aaKnown RBP4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 HAMPP81172 84 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 RHOHQ15669 191 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 ACOT6Q3I5F7 207 aaPredicted RBP4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 PDZD11Q5EBL8 140 aa4.99□□□□□ -1.61
TNFRSF11B-202ENST00000517352 PRR9Q5T870 116 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms