RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 OVOL1O14753 267 aa12.63□□□□□ -0.39
CHMP7-203ENST00000517325 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
CHMP7-203ENST00000517325 PSMB8P28062 276 aa12.63□□□□□ -0.39
CHMP7-203ENST00000517325 H3BVH4 76 aa12.62□□□□□ -0.39
CHMP7-203ENST00000517325 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
CHMP7-203ENST00000517325 SIVA1O15304 175 aa12.62□□□□□ -0.39
CHMP7-203ENST00000517325 SRD5A1P18405 259 aa12.62□□□□□ -0.39
CHMP7-203ENST00000517325 SMPXQ9UHP9 88 aa12.62□□□□□ -0.39
CHMP7-203ENST00000517325 AGRNO00468 2067 aa12.62□□□□□ -0.39
CHMP7-203ENST00000517325 WFDC2Q14508 124 aa12.61□□□□□ -0.39
CHMP7-203ENST00000517325 NHP2Q9NX24 153 aaKnown RBP12.61□□□□□ -0.39
CHMP7-203ENST00000517325 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
CHMP7-203ENST00000517325 ZNF843Q8N446 348 aa12.61□□□□□ -0.39
CHMP7-203ENST00000517325 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
CHMP7-203ENST00000517325 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 J3QLI3 93 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 KRTAP10-9P60411 292 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 SPANXN1Q5VSR9 72 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 IGHV4-4A0A075B6R2 117 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
CHMP7-203ENST00000517325 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
CHMP7-203ENST00000517325 LINC01546A6NGU7 62 aa12.59□□□□□ -0.39
CHMP7-203ENST00000517325 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.59□□□□□ -0.39
CHMP7-203ENST00000517325 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
CHMP7-203ENST00000517325 CHAC1Q9BUX1 264 aa12.59□□□□□ -0.39
CHMP7-203ENST00000517325 HHLA3Q9XRX5 114 aa12.59□□□□□ -0.39
CHMP7-203ENST00000517325 SPRY2O43597 315 aa12.59□□□□□ -0.39
CHMP7-203ENST00000517325 TRAV21A0A0B4J279 112 aa12.58□□□□□ -0.39
CHMP7-203ENST00000517325 Q5PR19 223 aa12.58□□□□□ -0.39
CHMP7-203ENST00000517325 AMTNQ6UX39 209 aa12.58□□□□□ -0.39
CHMP7-203ENST00000517325 K7EMT4 169 aa12.58□□□□□ -0.4
CHMP7-203ENST00000517325 PHLDA1Q8WV24 401 aaPredicted RBP12.58□□□□□ -0.4
CHMP7-203ENST00000517325 SIGMAR1Q99720 223 aa12.58□□□□□ -0.4
CHMP7-203ENST00000517325 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
CHMP7-203ENST00000517325 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
CHMP7-203ENST00000517325 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
CHMP7-203ENST00000517325 NRACQ8N912 160 aa12.58□□□□□ -0.4
CHMP7-203ENST00000517325 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 PRSS1P07477 247 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 LEPP41159 167 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 ANXA2RQ3ZCQ2 193 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 H3BMG7 143 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 ODF1Q14990 250 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
CHMP7-203ENST00000517325 GAGE12HA6NDE8 117 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 ETDBQ3ZM63 59 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 APRG1Q8IVJ8 170 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 FSHBP01225 129 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 FCER1GP30273 86 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 INSL3P51460 131 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
CHMP7-203ENST00000517325 MXRA5Q9NR99 2828 aa12.55□□□□□ -0.4
CHMP7-203ENST00000517325 M0R381 172 aa12.55□□□□□ -0.4
CHMP7-203ENST00000517325 Q8N8P6 123 aa12.55□□□□□ -0.4
CHMP7-203ENST00000517325 ZC2HC1BQ5TFG8 222 aa12.55□□□□□ -0.4
CHMP7-203ENST00000517325 MAPKAPK5-AS1Q8N8E1 139 aa12.55□□□□□ -0.4
CHMP7-203ENST00000517325 SPANXB1Q9NS25 103 aaPredicted RBP12.55□□□□□ -0.4
CHMP7-203ENST00000517325 CR1P17927 2039 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
CHMP7-203ENST00000517325 ASIPP42127 132 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 FOXC2Q99958 501 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 ABCA12Q86UK0 2595 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 GNRH2O43555 120 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
CHMP7-203ENST00000517325 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
CHMP7-203ENST00000517325 TMEM89A2RUT3 159 aa12.53□□□□□ -0.4
CHMP7-203ENST00000517325 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
CHMP7-203ENST00000517325 Q6YL49 198 aa12.53□□□□□ -0.4
CHMP7-203ENST00000517325 CEND1Q8N111 149 aa12.53□□□□□ -0.4
CHMP7-203ENST00000517325 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
CHMP7-203ENST00000517325 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
CHMP7-203ENST00000517325 ZNF702PQ9H963 129 aa12.53□□□□□ -0.4
CHMP7-203ENST00000517325 PRSS47A8MTI9 375 aa12.52□□□□□ -0.4
CHMP7-203ENST00000517325 IGLL5B9A064 214 aa12.52□□□□□ -0.4
CHMP7-203ENST00000517325 IGKCP01834 107 aa12.52□□□□□ -0.4
CHMP7-203ENST00000517325 ID1P41134 155 aa12.52□□□□□ -0.4
CHMP7-203ENST00000517325 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.4
CHMP7-203ENST00000517325 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.41
CHMP7-203ENST00000517325 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
CHMP7-203ENST00000517325 BEX4Q9NWD9 120 aaPredicted RBP12.52□□□□□ -0.41
CHMP7-203ENST00000517325 KLLNB2CW77 178 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 HOXA3O43365 443 aaPredicted RBP12.51□□□□□ -0.41
CHMP7-203ENST00000517325 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 E9PLD3 99 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 HIGD1BQ9P298 99 aa12.51□□□□□ -0.41
CHMP7-203ENST00000517325 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
CHMP7-203ENST00000517325 SYNJ2BPP57105 145 aa12.5□□□□□ -0.41
CHMP7-203ENST00000517325 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
CHMP7-203ENST00000517325 EPG5Q9HCE0 2579 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms