RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	JOSD1	Q15040	202 aa	Predicted RBP	3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TDRG1	Q3Y452	100 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	MRPL51	Q4U2R6	128 aa	Known RBP	3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PRR31	Q5SQ13	230 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	MUC21	Q5SSG8	566 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	FAM159A	Q6UWV7	190 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NIT1	Q86X76	327 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	AMN1	Q8IY45	258 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	OR2K2	Q8NGT1	345 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	CHCHD1	Q96BP2	118 aa	Known RBP	3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RNF185	Q96GF1	192 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	KCNS1	Q96KK3	526 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	MAP6D1	Q9H9H5	199 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	HLA-DRB4	X5D2U9	266 aa		3.32	□□□□□ -1.88
ATP2C1-223	ENST00000515854	OTOG	Q6ZRI0	2925 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TRAV12-3	A0A0B4J271	114 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RBMY1B	A6NDE4	496 aa	Known RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RBMY1E	A6NEQ0	496 aa	Known RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	KNCN	A6PVL3	124 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854		D6R8Y8	96 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854		H3BVH4	76 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854		M0R2Z0	102 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	CRX	O43186	299 aa	Predicted RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NXPH4	O95158	308 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	IGKV3-20	P01619	116 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	IGLV1-51	P01701	117 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PPBP	P02775	128 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RBMY1D	P0C7P1	496 aa	Known RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	LINC00614	P0C842	121 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RNASE3	P12724	160 aa	Known RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	S100A4	P26447	101 aa	Known RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	CMC4	P56277	68 aa	Predicted RBP	3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SST	P61278	116 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SPINK13	Q1W4C9	94 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NSUN5P1	Q3KNT7	163 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	ODF3L2	Q3SX64	289 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SPANXN1	Q5VSR9	72 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854		Q6ZWC4	215 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	ORMDL3	Q8N138	153 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	OR10AG1	Q8NH19	301 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PRELID3A	Q96N28	172 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SAMD10	Q9BYL1	202 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NIT2	Q9NQR4	276 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NAGK	Q9UJ70	344 aa		3.31	□□□□□ -1.88
ATP2C1-223	ENST00000515854	ACAN	P16112	2415 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TRAV12-2	A0A075B6T6	113 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	IGHV1OR15-1	A0A075B7D0	117 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	IGHV3-16	A0A0C4DH30	117 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PRSS47	A8MTI9	375 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SAP30	O75446	220 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	HSBP1	O75506	76 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RBMY1A1	P0DJD3	496 aa	Known RBP	3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RBMY1C	P0DJD4	496 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PMCH	P20382	165 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	EVI2A	P22794	236 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	CKS2	P33552	79 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	AMT	P48728	403 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	ODF1	Q14990	250 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RBMY1F	Q15415	496 aa	Known RBP	3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	BEAN1	Q3B7T3	259 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	RNASEK	Q6P5S7	137 aa	Known RBP	3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SMIM15	Q7Z3B0	74 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	FAM19A2	Q8N3H0	131 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	DEFB125	Q8N687	156 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	POM121L12	Q8N7R1	296 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	LINC00482	Q8N8I6	264 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	C9orf85	Q96MD7	179 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	FAM110A	Q9BQ89	295 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	LINC00467	Q9BRT7	94 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	C19orf73	Q9NVV2	129 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	LAMTOR2	Q9Y2Q5	125 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PHLDA3	Q9Y5J5	127 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	MYO9A	B2RTY4	2548 aa		3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SON	P18583	2426 aa	Known RBP	3.3	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TLN2	Q9Y4G6	2542 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	HIVEP2	P31629	2446 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TRGV11	A0A075B6L2	103 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	IGHV1-24	A0A0C4DH33	117 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	LINC01546	A6NGU7	62 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	OR11H12	B2RN74	326 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SMKR1	H3BMG3	65 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854		M0R381	172 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SPRY2	O43597	315 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	GAS8-AS1	O95177	125 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TNFRSF6B	O95407	300 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NCR2	O95944	276 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	NPY	P01303	97 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	CD7	P09564	240 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	FXYD7	P58549	80 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	LINC00315	P59091	139 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	TRPT1	Q86TN4	253 aa	Known RBP	3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854		Q8N976	141 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	SVIP	Q8NHG7	77 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	PRSS3P2	Q8NHM4	247 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	MRAP2	Q96G30	205 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	CITED1	Q99966	193 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	C20orf144	Q9BQM9	153 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	DPH3P1	Q9H4G8	78 aa		3.29	□□□□□ -1.88
ATP2C1-223	ENST00000515854	GSN-AS1	Q9NRJ2	163 aa		3.29	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms