RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PRELID3AQ96N28 172 aa11.5□□□□□ -0.57
THUMPD3-210ENST00000515662 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
THUMPD3-210ENST00000515662 DUSP14O95147 198 aaKnown RBP11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 IGKV3-20P01619 116 aa11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 ASIPP42127 132 aa11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 HINT1P49773 126 aaPredicted RBP11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 LAMTOR2Q9Y2Q5 125 aa11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 CKS2P33552 79 aa11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 COL5A1-AS1Q5SY13 56 aa11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 SPANXN1Q5VSR9 72 aa11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 TIMM8BQ9Y5J9 83 aaPredicted RBP11.49□□□□□ -0.57
THUMPD3-210ENST00000515662 IGHV1-24A0A0C4DH33 117 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 C7orf71A4D174 169 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 GNRH2O43555 120 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 MED14OSP0DP75 135 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 S100A4P26447 101 aaKnown RBP11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 TSPOP30536 169 aa11.48□□□□□ -0.57
THUMPD3-210ENST00000515662 NCR2O95944 276 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 EVI2AP22794 236 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 DEFB131AP59861 70 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 SCRT2Q9NQ03 307 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 NOTCH2Q04721 2471 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 TRAV9-2A0A087WT02 112 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 H0Y8G0 127 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 PPBPP02775 128 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 FOSL1P15407 271 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 PROK1P58294 105 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 CD300EQ496F6 205 aaPredicted RBP11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 AMTNQ6UX39 209 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 PRSS3P2Q8NHM4 247 aa11.47□□□□□ -0.57
THUMPD3-210ENST00000515662 RNASE3P12724 160 aaKnown RBP11.46□□□□□ -0.57
THUMPD3-210ENST00000515662 CDKN1BP46527 198 aa11.46□□□□□ -0.57
THUMPD3-210ENST00000515662 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.57
THUMPD3-210ENST00000515662 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.57
THUMPD3-210ENST00000515662 SIGLEC8Q9NYZ4 499 aa11.46□□□□□ -0.57
THUMPD3-210ENST00000515662 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 hDV102S1A0JD36 115 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 KNCNA6PVL3 124 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 INAFM1C9JVW0 142 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 SPRY2O43597 315 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 NPYP01303 97 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 SPINK13Q1W4C9 94 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.58
THUMPD3-210ENST00000515662 LOC389332A0A1B0GUA5 103 aa11.45□□□□□ -0.58
THUMPD3-210ENST00000515662 FA2HQ7L5A8 372 aa11.45□□□□□ -0.58
THUMPD3-210ENST00000515662 TMEM70Q9BUB7 260 aa11.45□□□□□ -0.58
THUMPD3-210ENST00000515662 AP5S1Q9NUS5 200 aa11.45□□□□□ -0.58
THUMPD3-210ENST00000515662 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
THUMPD3-210ENST00000515662 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
THUMPD3-210ENST00000515662 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
THUMPD3-210ENST00000515662 A8MTW9 85 aa11.44□□□□□ -0.58
THUMPD3-210ENST00000515662 M0R381 172 aa11.44□□□□□ -0.58
THUMPD3-210ENST00000515662 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
THUMPD3-210ENST00000515662 SPAG8Q99932 426 aaPredicted RBP11.44□□□□□ -0.58
THUMPD3-210ENST00000515662 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
THUMPD3-210ENST00000515662 TRAV25A0A0B4J276 109 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 ADARB2-AS1A8MUL3 147 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 H3BMM0 161 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 TCF21O43680 179 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 GAGE1Q13065 139 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 ZNF256Q9Y2P7 627 aaPredicted RBP11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 SYS1-DBNDD2H3BUS1 97 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 LEPROTL1O95214 131 aa11.43□□□□□ -0.58
THUMPD3-210ENST00000515662 CD7P09564 240 aa11.42□□□□□ -0.58
THUMPD3-210ENST00000515662 ERASQ7Z444 233 aa11.42□□□□□ -0.58
THUMPD3-210ENST00000515662 NXPH4O95158 308 aa11.42□□□□□ -0.58
THUMPD3-210ENST00000515662 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
THUMPD3-210ENST00000515662 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
THUMPD3-210ENST00000515662 RBMY1BA6NDE4 496 aaKnown RBP11.41□□□□□ -0.58
THUMPD3-210ENST00000515662 RBMY1EA6NEQ0 496 aaKnown RBP11.41□□□□□ -0.58
THUMPD3-210ENST00000515662 RBMY1DP0C7P1 496 aaKnown RBP11.41□□□□□ -0.58
THUMPD3-210ENST00000515662 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
THUMPD3-210ENST00000515662 AGRNO00468 2067 aa11.41□□□□□ -0.58
THUMPD3-210ENST00000515662 IGHV1OR15-1A0A075B7D0 117 aa11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 IGHV3-16A0A0C4DH30 117 aa11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 FXYD7P58549 80 aa11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 SETD2Q9BYW2 2564 aaPredicted RBP11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 OR2K2Q8NGT1 345 aa11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 MRPS16Q9Y3D3 137 aaKnown RBP11.4□□□□□ -0.58
THUMPD3-210ENST00000515662 CRXO43186 299 aaPredicted RBP11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 KRTAP10-3P60369 221 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 Q8N1Y9 231 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 NRACQ8N912 160 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 MRAP2Q96G30 205 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 DPH3P1Q9H4G8 78 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 SORL1Q92673 2214 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 A0A096LNJ9 63 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
THUMPD3-210ENST00000515662 HSPB8Q9UJY1 196 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms