RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	TREM1	Q9NP99	234 aa		6.66	□□□□□ -1.34
CLDND1-231	ENST00000515620	FLVCR2	Q9UPI3	526 aa		6.66	□□□□□ -1.34
CLDND1-231	ENST00000515620		A0A0J9YXV3	536 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	IGSF23	A1L1A6	192 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	PGP	A6NDG6	321 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	PHOX2A	O14813	284 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	NDUFB6	O95139	128 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	CRP	P02741	224 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	S100A11	P31949	105 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	SULT1A1	P50225	295 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	FGF8	P55075	233 aa	Predicted RBP	6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	RPL19	P84098	196 aa	Known RBP	6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	CIRBP	Q14011	172 aa	Known RBP	6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	SPANXN2	Q5MJ10	180 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	ENHO	Q6UWT2	76 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	C14orf178	Q8N769	122 aa	Predicted RBP	6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	DPH3	Q96FX2	82 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	BCL7B	Q9BQE9	202 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	CHCHD7	Q9BUK0	85 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620	KIF25-AS1	Q9Y6Z4	181 aa		6.65	□□□□□ -1.34
CLDND1-231	ENST00000515620		A0A087WYN8	130 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	SMIM18	P0DKX4	95 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	HBG1	P69891	147 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	HBG2	P69892	147 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	WDR73	Q6P4I2	378 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	ZFP2	Q6ZN57	461 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	GOLT1A	Q6ZVE7	132 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	STX12	Q86Y82	276 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	C15orf54	Q8N8G6	183 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	TMEM75	Q8N9X5	138 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	THAP6	Q8TBB0	222 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	DEDD2	Q8WXF8	326 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	NMES1	Q9C002	83 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	C11orf1	Q9H5F2	150 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	C11orf21	Q9P2W6	132 aa		6.64	□□□□□ -1.35
CLDND1-231	ENST00000515620	FAM25E	A8MYX2	175 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620	CHTF8	P0CG12	524 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620	CMTM2	Q8TAZ6	248 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620	C7orf33	Q8WU49	177 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620	PTH2	Q96A98	100 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620	LINC00479	Q96M42	142 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620	LYRM2	Q9NU23	88 aa	Predicted RBP	6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620		V9GYH0	126 aa		6.63	□□□□□ -1.35
CLDND1-231	ENST00000515620		A8MWV9	139 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	TMEM262	E9PQX1	116 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	RNASE3	P12724	160 aa	Known RBP	6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	PVALB	P20472	110 aa	Predicted RBP	6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	ZNF80	P51504	273 aa	Predicted RBP	6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	KRTAP10-8	P60410	259 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	S100A10	P60903	97 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	PRR3	P79522	188 aa	Known RBP	6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	LGALSL	Q3ZCW2	172 aa	Predicted RBP	6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	TMEM252	Q8N6L7	170 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	OR2G3	Q8NGZ4	309 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	SPACA4	Q8TDM5	124 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	MITD1	Q8WV92	249 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	RNF185	Q96GF1	192 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	SLIRP	Q9GZT3	109 aa	Known RBP	6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	JPT2	Q9H910	190 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	OTOR	Q9NRC9	128 aa		6.62	□□□□□ -1.35
CLDND1-231	ENST00000515620	ANG	P03950	147 aa	Known RBP	6.61	□□□□□ -1.35
CLDND1-231	ENST00000515620	ATP6V1F	Q16864	119 aa		6.61	□□□□□ -1.35
CLDND1-231	ENST00000515620	MPV17L2	Q567V2	206 aa		6.61	□□□□□ -1.35
CLDND1-231	ENST00000515620	UFSP1	Q6NVU6	142 aa		6.61	□□□□□ -1.35
CLDND1-231	ENST00000515620	OR10G7	Q8NGN6	311 aa		6.61	□□□□□ -1.35
CLDND1-231	ENST00000515620	SGK494	Q96LW2	274 aa		6.61	□□□□□ -1.35
CLDND1-231	ENST00000515620	IGHV3-64	A0A075B6Q5	118 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	TAAR5	O14804	337 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	GNG5	P63218	68 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	KHDC3L	Q587J8	217 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	FAM74A1	Q5RGS3	127 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	REG3G	Q6UW15	175 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	CLPSL2	Q6UWE3	100 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	NDFIP1	Q9BT67	221 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	KCNIP2	Q9NS61	270 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	PLAC8	Q9NZF1	115 aa		6.6	□□□□□ -1.35
CLDND1-231	ENST00000515620	LPA	P08519	4548 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	TMEM238L	A0A1B0GVL6	79 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	hDV102S1	A0JD36	115 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	EIF3G	O75821	320 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	GCG	P01275	180 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	CNBP	P62633	177 aa	Known RBP	6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	MIA	Q16674	131 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	FAM74A4	Q5TZK3	123 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	GTSF1	Q8WW33	167 aa		6.59	□□□□□ -1.35
CLDND1-231	ENST00000515620	NAP1L6	A6NFF2	107 aa		6.58	□□□□□ -1.36
CLDND1-231	ENST00000515620	RHOD	O00212	210 aa		6.58	□□□□□ -1.36
CLDND1-231	ENST00000515620	S100A4	P26447	101 aa	Known RBP	6.58	□□□□□ -1.36
CLDND1-231	ENST00000515620	OR5C1	Q8NGR4	320 aa		6.58	□□□□□ -1.36
CLDND1-231	ENST00000515620	MBD2	Q9UBB5	411 aa		6.58	□□□□□ -1.36
CLDND1-231	ENST00000515620		A0A087WWL8	130 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	TRBV6-8	A0A0A6YYG3	113 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620		A0A0U1RQV1	116 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	TAS2R45	P59539	299 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	UBE2D3	P61077	147 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	UBE2D2	P62837	147 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	NHLH2	Q02577	135 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	RAB32	Q13637	225 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	PIK3CD-AS1	Q5SR53	167 aa		6.57	□□□□□ -1.36
CLDND1-231	ENST00000515620	KRTAP26-1	Q6PEX3	210 aa		6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms