RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 A0A1W2PNN7 141 aa7.67□□□□□ -1.18
SMAD1-216ENST00000515527 EIF3GO75821 320 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMAD1-216ENST00000515527 PYYP10082 97 aa7.67□□□□□ -1.18
SMAD1-216ENST00000515527 RPL36AP83881 106 aaKnown RBP7.67□□□□□ -1.18
SMAD1-216ENST00000515527 PACRGLQ8N7B6 248 aa7.67□□□□□ -1.18
SMAD1-216ENST00000515527 RPL36ALQ969Q0 106 aaKnown RBP7.67□□□□□ -1.18
SMAD1-216ENST00000515527 PTH2Q96A98 100 aa7.67□□□□□ -1.18
SMAD1-216ENST00000515527 MIXL1Q9H2W2 232 aa7.67□□□□□ -1.18
SMAD1-216ENST00000515527 LENEPQ9Y5L5 61 aa7.67□□□□□ -1.18
SMAD1-216ENST00000515527 UBE2D3P61077 147 aa7.66□□□□□ -1.18
SMAD1-216ENST00000515527 UBE2D2P62837 147 aa7.66□□□□□ -1.18
SMAD1-216ENST00000515527 PHF5AQ7RTV0 110 aaKnown RBP7.66□□□□□ -1.18
SMAD1-216ENST00000515527 RPP21Q9H633 154 aaKnown RBP7.66□□□□□ -1.18
SMAD1-216ENST00000515527 JPT2Q9H910 190 aa7.66□□□□□ -1.18
SMAD1-216ENST00000515527 COMMD3Q9UBI1 195 aa7.66□□□□□ -1.18
SMAD1-216ENST00000515527 MGAT4CQ9UBM8 478 aa7.66□□□□□ -1.18
SMAD1-216ENST00000515527 A0A087WZ39 114 aa7.65□□□□□ -1.18
SMAD1-216ENST00000515527 GAGE6Q13070 117 aa7.65□□□□□ -1.18
SMAD1-216ENST00000515527 Q6ZRG5 221 aa7.65□□□□□ -1.18
SMAD1-216ENST00000515527 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
SMAD1-216ENST00000515527 C12orf45Q8N5I9 185 aaPredicted RBP7.65□□□□□ -1.18
SMAD1-216ENST00000515527 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
SMAD1-216ENST00000515527 CCDC59Q9P031 241 aaKnown RBP7.65□□□□□ -1.18
SMAD1-216ENST00000515527 RBAKDNA6NC62 111 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 F6UZH7 168 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 CSN1S1P47710 185 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 PTTG1IPP53801 180 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 S100A10P60903 97 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 GAGE2BQ13066 116 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 ZNF674Q2M3X9 581 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 UFSP1Q6NVU6 142 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 TMEM14CQ9P0S9 112 aa7.64□□□□□ -1.19
SMAD1-216ENST00000515527 TRBV7-3A0A075B6L6 115 aa7.63□□□□□ -1.19
SMAD1-216ENST00000515527 FAM74A4Q5TZK3 123 aa7.63□□□□□ -1.19
SMAD1-216ENST00000515527 OR1L4Q8NGR5 311 aa7.63□□□□□ -1.19
SMAD1-216ENST00000515527 SMIM31A0A1B0GVY4 71 aa7.62□□□□□ -1.19
SMAD1-216ENST00000515527 PFDN5Q99471 154 aa7.62□□□□□ -1.19
SMAD1-216ENST00000515527 MGST2Q99735 147 aa7.62□□□□□ -1.19
SMAD1-216ENST00000515527 FNDC10F2Z333 226 aa7.61□□□□□ -1.19
SMAD1-216ENST00000515527 RHODO00212 210 aa7.61□□□□□ -1.19
SMAD1-216ENST00000515527 ATP5HO75947 161 aa7.61□□□□□ -1.19
SMAD1-216ENST00000515527 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
SMAD1-216ENST00000515527 PHLDA3Q9Y5J5 127 aa7.61□□□□□ -1.19
SMAD1-216ENST00000515527 TRAV6A0A075B6T7 132 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 GAGE12HA6NDE8 117 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 TMEM127O75204 238 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 RAB3DO95716 219 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
SMAD1-216ENST00000515527 KRTAP20-1Q3LI63 56 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.6□□□□□ -1.19
SMAD1-216ENST00000515527 CARD19Q96LW7 228 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
SMAD1-216ENST00000515527 PSENENQ9NZ42 101 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 RABL2AQ9UBK7 228 aaPredicted RBP7.6□□□□□ -1.19
SMAD1-216ENST00000515527 RABL2BQ9UNT1 228 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 GPR132Q9UNW8 380 aa7.6□□□□□ -1.19
SMAD1-216ENST00000515527 GVQW2A0A096LPI5 108 aaPredicted RBP7.59□□□□□ -1.19
SMAD1-216ENST00000515527 KRTAP4-16G5E9R7 235 aaPredicted RBP7.59□□□□□ -1.19
SMAD1-216ENST00000515527 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
SMAD1-216ENST00000515527 MIC13Q5XKP0 118 aa7.59□□□□□ -1.19
SMAD1-216ENST00000515527 DIRAS2Q96HU8 199 aa7.59□□□□□ -1.19
SMAD1-216ENST00000515527 A0A087X002 238 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 LOC100506127A0A0U1RQW1 187 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 NBEAP1P0C6P0 100 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 METTL15P1P0C7V9 234 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 CAMLGP49069 296 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 FAAP20Q6NZ36 180 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 C11orf21Q9P2W6 132 aa7.58□□□□□ -1.2
SMAD1-216ENST00000515527 SLC25A6P12236 298 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 ANXA3P12429 323 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 PIK3CD-AS1Q5SR53 167 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 DYNC2LI1Q8TCX1 351 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 TMED6Q8WW62 240 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 BCL7BQ9BQE9 202 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 TREM1Q9NP99 234 aa7.57□□□□□ -1.2
SMAD1-216ENST00000515527 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 SULT1A2P50226 295 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 EIF5AL1Q6IS14 154 aaKnown RBP7.56□□□□□ -1.2
SMAD1-216ENST00000515527 NTM-AS1Q6ZSK4 140 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 C20orf203Q8NBC4 194 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 PHYHIPLQ96FC7 376 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 LINC00526Q96FQ7 95 aa7.56□□□□□ -1.2
SMAD1-216ENST00000515527 PIGBOS1A0A0B4J2F0 54 aa7.55□□□□□ -1.2
SMAD1-216ENST00000515527 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
SMAD1-216ENST00000515527 TSHBP01222 138 aa7.55□□□□□ -1.2
SMAD1-216ENST00000515527 S100A4P26447 101 aaKnown RBP7.55□□□□□ -1.2
SMAD1-216ENST00000515527 TAS2R19P59542 299 aa7.55□□□□□ -1.2
SMAD1-216ENST00000515527 NRARPQ7Z6K4 114 aa7.55□□□□□ -1.2
SMAD1-216ENST00000515527 TRBV25-1A0A075B6N4 114 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 RANP62826 216 aaKnown RBP7.54□□□□□ -1.2
SMAD1-216ENST00000515527 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 TSKUQ8WUA8 353 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 NMES1Q9C002 83 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 NEBP20929 6669 aa7.54□□□□□ -1.2
SMAD1-216ENST00000515527 IGLV4-60A0A075B6I1 120 aa7.53□□□□□ -1.2
SMAD1-216ENST00000515527 DISC1C4P0D8 188 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms