RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	TRBV6-4	A0A1B0GX49	114 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	SEC11B	P0C7V7	166 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	DNAH10OS	P0CZ25	163 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	FGF8	P55075	233 aa	Predicted RBP	11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	UBE2G2	P60604	165 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	DPPA3	Q6W0C5	159 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	NFE4	Q86UQ8	179 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	STOML3	Q8TAV4	291 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	ZFP30	Q9Y2G7	519 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	LY96	Q9Y6Y9	160 aa		11.42	□□□□□ -0.58
MATR3-222	ENST00000513678	UMAD1	C9J7I0	102 aa		11.41	□□□□□ -0.58
MATR3-222	ENST00000513678	ZNF506	Q5JVG8	444 aa		11.41	□□□□□ -0.58
MATR3-222	ENST00000513678	DNLZ	Q5SXM8	178 aa		11.41	□□□□□ -0.58
MATR3-222	ENST00000513678	BOLA1	Q9Y3E2	137 aa		11.41	□□□□□ -0.58
MATR3-222	ENST00000513678	FAT1	Q14517	4588 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678		A0A0D9SG52	128 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	PGPEP1L	A6NFU8	196 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	SMLR1	H3BR10	107 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	RHOH	Q15669	191 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	ZFP2	Q6ZN57	461 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	WFDC10B	Q8IUB3	73 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678		Q8N1X5	172 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	SLC25A29	Q8N8R3	303 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	FMC1	Q96HJ9	113 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	TNFRSF18	Q9Y5U5	241 aa		11.4	□□□□□ -0.58
MATR3-222	ENST00000513678	LOC100131303	A0A0U1RQF7	123 aa		11.39	□□□□□ -0.59
MATR3-222	ENST00000513678	MGST1	P10620	155 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-222	ENST00000513678	EVI2A	P22794	236 aa		11.39	□□□□□ -0.59
MATR3-222	ENST00000513678	OR11H4	Q8NGC9	324 aa		11.39	□□□□□ -0.59
MATR3-222	ENST00000513678	MBD3L1	Q8WWY6	194 aa		11.39	□□□□□ -0.59
MATR3-222	ENST00000513678	PRADC1	Q9BSG0	188 aa		11.39	□□□□□ -0.59
MATR3-222	ENST00000513678	IL36B	Q9NZH7	164 aa		11.39	□□□□□ -0.59
MATR3-222	ENST00000513678		A8MWV9	139 aa		11.38	□□□□□ -0.59
MATR3-222	ENST00000513678	ASIP	P42127	132 aa		11.38	□□□□□ -0.59
MATR3-222	ENST00000513678	CRIP1	P50238	77 aa		11.38	□□□□□ -0.59
MATR3-222	ENST00000513678	ERVFC1-1	P60608	527 aa		11.38	□□□□□ -0.59
MATR3-222	ENST00000513678	C10orf126	Q8N4M7	172 aa		11.38	□□□□□ -0.59
MATR3-222	ENST00000513678	BCL2L11	O43521	198 aa		11.37	□□□□□ -0.59
MATR3-222	ENST00000513678	LTA	P01374	205 aa		11.37	□□□□□ -0.59
MATR3-222	ENST00000513678	S100A4	P26447	101 aa	Known RBP	11.37	□□□□□ -0.59
MATR3-222	ENST00000513678	NHLRC2	Q8NBF2	726 aa		11.37	□□□□□ -0.59
MATR3-222	ENST00000513678	ZC2HC1A	Q96GY0	325 aa		11.37	□□□□□ -0.59
MATR3-222	ENST00000513678		B4DEV8	164 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	KRBOX1	C9JBD0	128 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	UBE2G1	P62253	170 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	EIF5A	P63241	154 aa	Known RBP	11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	ZNF674	Q2M3X9	581 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	FAM162B	Q5T6X4	162 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	CDPF1	Q6NVV7	123 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	PARL	Q9H300	379 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	PGPEP1	Q9NXJ5	209 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678	MSRB1	Q9NZV6	116 aa		11.36	□□□□□ -0.59
MATR3-222	ENST00000513678		A0A087WTM6	91 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	IGHV3-38	A0A0C4DH36	116 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	KANTR	A0A1W2PQU2	76 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	SH2D1A	O60880	128 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	LINC01559	Q495D7	138 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	LINC01556	Q5JQF7	62 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	CST9LP1	Q5W188	147 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	UFSP1	Q6NVU6	142 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	SFT2D1	Q8WV19	159 aa		11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	ZNF471	Q9BX82	626 aa	Predicted RBP	11.35	□□□□□ -0.59
MATR3-222	ENST00000513678	EREG	O14944	169 aa		11.34	□□□□□ -0.59
MATR3-222	ENST00000513678	PAGE4	O60829	102 aa		11.34	□□□□□ -0.59
MATR3-222	ENST00000513678	S100A9	P06702	114 aa	Known RBP	11.34	□□□□□ -0.59
MATR3-222	ENST00000513678	FAM213B	Q8TBF2	198 aa		11.34	□□□□□ -0.59
MATR3-222	ENST00000513678	SCRT2	Q9NQ03	307 aa		11.34	□□□□□ -0.59
MATR3-222	ENST00000513678	IGHV3-73	A0A0B4J1V6	119 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	TRAV8-6	A0A0B4J262	113 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	CRYGD	P07320	174 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	LINC00694	P0DN24	101 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	AKR1C3	P42330	323 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	LELP1	Q5T871	98 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678	GTSF1L	Q9H1H1	148 aa		11.33	□□□□□ -0.6
MATR3-222	ENST00000513678		H3BVH4	76 aa		11.32	□□□□□ -0.6
MATR3-222	ENST00000513678	RHOD	O00212	210 aa		11.32	□□□□□ -0.6
MATR3-222	ENST00000513678	ARMS2	P0C7Q2	107 aa		11.32	□□□□□ -0.6
MATR3-222	ENST00000513678	FUS	P35637	526 aa	Known RBP eCLIP	11.32	□□□□□ -0.6	1e-7	■■■■□ 24.9
MATR3-222	ENST00000513678		Q6ZSN1	163 aa		11.32	□□□□□ -0.6
MATR3-222	ENST00000513678	SYT8	Q8NBV8	401 aa		11.32	□□□□□ -0.6
MATR3-222	ENST00000513678	ATP6V0E2	Q8NHE4	81 aa		11.32	□□□□□ -0.6
MATR3-222	ENST00000513678		M0R036	132 aa		11.31	□□□□□ -0.6
MATR3-222	ENST00000513678	H2AFB1	P0C5Y9	115 aa		11.31	□□□□□ -0.6
MATR3-222	ENST00000513678	TPT1	P13693	172 aa	Known RBP	11.31	□□□□□ -0.6
MATR3-222	ENST00000513678	DMRTA1	Q5VZB9	504 aa		11.31	□□□□□ -0.6
MATR3-222	ENST00000513678	TMUB2	Q71RG4	321 aa		11.31	□□□□□ -0.6
MATR3-222	ENST00000513678	MLST8	Q9BVC4	326 aa		11.31	□□□□□ -0.6
MATR3-222	ENST00000513678	IBA57-AS1	B1ANH7	110 aa		11.3	□□□□□ -0.6
MATR3-222	ENST00000513678	PFDN1	O60925	122 aa		11.3	□□□□□ -0.6
MATR3-222	ENST00000513678	CXCL1	P09341	107 aa		11.3	□□□□□ -0.6
MATR3-222	ENST00000513678	TRAV1-1	A0A0B4J248	108 aa		11.29	□□□□□ -0.6
MATR3-222	ENST00000513678	OR10J3	Q5JRS4	329 aa		11.29	□□□□□ -0.6
MATR3-222	ENST00000513678	SFRP2	Q96HF1	295 aa		11.29	□□□□□ -0.6
MATR3-222	ENST00000513678	SAMD10	Q9BYL1	202 aa		11.29	□□□□□ -0.6
MATR3-222	ENST00000513678	JPT2	Q9H910	190 aa		11.29	□□□□□ -0.6
MATR3-222	ENST00000513678	PHLDA3	Q9Y5J5	127 aa		11.29	□□□□□ -0.6
MATR3-222	ENST00000513678	SCO2	A0A1W2PP80	73 aa		11.28	□□□□□ -0.6
MATR3-222	ENST00000513678	GRIFIN	A4D1Z8	144 aa		11.28	□□□□□ -0.6
MATR3-222	ENST00000513678	RAB5C	P51148	216 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 126 ms