RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 AKR1D1P51857 326 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 KLKP1Q107X0 134 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 ZNF56Q15929 161 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 UNQ5815/PRO19632Q6UWF5 114 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 SLC25A26Q70HW3 274 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 ATP6V0E2Q8NHE4 81 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 PPDPFLQ8WWR9 84 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 VPS25Q9BRG1 176 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 SLC35B3Q9H1N7 401 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 BANF2Q9H503 90 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 POLQO75417 2590 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 AFDNP55196 1824 aaKnown RBP0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 UHRF1BP1LA0JNW5 1464 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 KIDINS220Q9ULH0 1771 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
TRAPPC11-210ENST00000513600 CPDO75976 1380 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 AHCTF1Q8WYP5 2266 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 A0A096LNT2 108 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 TEX49A0A1B0GTD5 131 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 CXorf51AA0A1B0GTR3 108 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 IQCJQ1A5X6 159 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 TMEM14BQ9NUH8 114 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 FSIP2Q5CZC0 6907 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 SPTBN2O15020 2390 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 ZCCHC6Q5VYS8 1495 aaKnown RBP0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 BLMP54132 1417 aaPredicted RBP0.21□□□□□ -2.38
TRAPPC11-210ENST00000513600 CCDC171Q6TFL3 1326 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 LOC285556D6RIA3 1793 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 DLEC1Q9Y238 1755 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 TRAV17A0A0B4J275 112 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 FXYD1O00168 92 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 APOC1P02654 83 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 RBP4P02753 201 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 KRTAP2-3P0C7H8 128 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 ATP11AUNQ6ZP68 121 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 NDUFA11Q86Y39 141 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 PPP1R1CQ8WVI7 109 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 KRTAP2-4Q9BYR9 128 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 KRTAP2-1Q9BYU5 128 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 CDK12Q9NYV4 1490 aaPredicted RBP0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 LRP5O75197 1615 aa0.2□□□□□ -2.38
TRAPPC11-210ENST00000513600 TRAV12-2A0A075B6T6 113 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 MCRIP1C9JLW8 97 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 M0R2P5 195 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 CLLU1Q5K131 121 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 SNX29P2Q8IUI4 249 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 MMGT1Q8N4V1 131 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 DYNLRB2Q8TF09 96 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 BATF3Q9NR55 127 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 COA4Q9NYJ1 87 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 BET1LQ9NYM9 111 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 ERG28Q9UKR5 140 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 LSM2Q9Y333 95 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 NOP16Q9Y3C1 178 aaKnown RBP0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 MEGF8Q7Z7M0 2845 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 MYH13Q9UKX3 1938 aa0.19□□□□□ -2.38
TRAPPC11-210ENST00000513600 BCORL1Q5H9F3 1711 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 CDK5RAP2Q96SN8 1893 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 TRBV20-1A0A075B6N2 111 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 CCDC179H3BU77 68 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 J3QLW9 94 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 MPC1LP0DKB6 136 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 PYYP10082 97 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 SLC25A6P12236 298 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 NCS1P62166 190 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 HIST1H1AQ02539 215 aaPredicted RBP0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 ALX1Q15699 326 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 OR2T2Q6IF00 324 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 TMEM141Q96I45 108 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 DSCR8Q96T75 97 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 SAR1AQ9NR31 198 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 OVOS2A0A0J9YW53 1432 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 OVOS2Q6IE36 1432 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 PLXNA2O75051 1894 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 TANC1Q9C0D5 1861 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 NCOR2Q9Y618 2525 aa0.18□□□□□ -2.38
TRAPPC11-210ENST00000513600 DISP2A7MBM2 1401 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 ZNF670-ZNF695F2Z2N8 137 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 ARPC5O15511 151 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 NCR2O95944 276 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 TSPAN19P0C672 248 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 KDM5CP41229 1560 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 ELOF1P60002 83 aaKnown RBP0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 CKS1BP61024 79 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 EMX2Q04743 252 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 SPINK6Q6UWN8 80 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 TSKUQ8WUA8 353 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 GSKIPQ9P0R6 139 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 UNC13AQ9UPW8 1703 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 RREB1Q92766 1687 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 ARHGEF10O15013 1369 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 C2CD3Q4AC94 2353 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 CASZ1Q86V15 1759 aa0.17□□□□□ -2.38
TRAPPC11-210ENST00000513600 MAP2P11137 1827 aaKnown RBP0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 MAST4O15021 2626 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 TCRBV3S1A0A5B6 114 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms