RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	MRPL16	Q9NX20	251 aa	Known RBP	11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	RNASE3	P12724	160 aa	Known RBP	11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495	NANOS2	P60321	138 aa	Known RBP	11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495	ZNF876P	Q49A33	203 aa		11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495		Q6ZTI0	123 aa		11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495	FER1L6-AS1	Q8NA97	138 aa		11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495	NDUFAF3	Q9BU61	184 aa		11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495	TPPP3	Q9BW30	176 aa		11.23	□□□□□ -0.61
SH3TC1-223	ENST00000513495	TG	P01266	2768 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495	PPP1R2P9	O14990	202 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495	OR5AL1	P0C617	328 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495	C12orf74	Q32Q52	190 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495	ZFP82	Q8N141	532 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495	RASL10A	Q92737	203 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495	PTH2	Q96A98	100 aa		11.22	□□□□□ -0.61
SH3TC1-223	ENST00000513495		F2Z2F3	143 aa		11.21	□□□□□ -0.61
SH3TC1-223	ENST00000513495	MT-ND4L	P03901	98 aa		11.21	□□□□□ -0.61
SH3TC1-223	ENST00000513495	ATP5G1	P05496	136 aa		11.21	□□□□□ -0.61
SH3TC1-223	ENST00000513495	PIK3CD-AS1	Q5SR53	167 aa		11.21	□□□□□ -0.61
SH3TC1-223	ENST00000513495	SPANXN1	Q5VSR9	72 aa		11.21	□□□□□ -0.61
SH3TC1-223	ENST00000513495	BORCS7	Q96B45	105 aa		11.21	□□□□□ -0.61
SH3TC1-223	ENST00000513495	TRAV10	A0A0B4J240	114 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495		M0R381	172 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495	GZMB	P10144	247 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495		Q6ZTC4	211 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495	LINC00612	Q8N6U2	182 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495	C18orf15	Q96N68	181 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495	GFRA4	Q9GZZ7	299 aa		11.2	□□□□□ -0.62
SH3TC1-223	ENST00000513495	DNAH9	Q9NYC9	4486 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SNAI2	O43623	268 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	HTN3	P15516	51 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	ADCYAP1	P18509	176 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	CACNG7	P62955	275 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	MUC7	Q8TAX7	377 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	TSKU	Q8WUA8	353 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	ANAPC16	Q96DE5	110 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SCRT2	Q9NQ03	307 aa		11.19	□□□□□ -0.62
SH3TC1-223	ENST00000513495	DEFB131B	A0A096LNP1	70 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	FAM231B	A6NCW3	169 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	NUPR2	A6NF83	97 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495		A8MWV9	139 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	CIDEA	O60543	219 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	IGLC6	P0CF74	106 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	OR4C5	Q8NGB2	326 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495		V9GYV3	84 aa		11.18	□□□□□ -0.62
SH3TC1-223	ENST00000513495	TRAV4	A0A0B4J268	109 aa		11.17	□□□□□ -0.62
SH3TC1-223	ENST00000513495		F5H768	121 aa		11.17	□□□□□ -0.62
SH3TC1-223	ENST00000513495	LYZL1	Q6UWQ5	148 aa		11.17	□□□□□ -0.62
SH3TC1-223	ENST00000513495	OR10AG1	Q8NH19	301 aa		11.17	□□□□□ -0.62
SH3TC1-223	ENST00000513495	KLK5	Q9Y337	293 aa	Predicted RBP	11.17	□□□□□ -0.62
SH3TC1-223	ENST00000513495	CTRL	P40313	264 aa		11.16	□□□□□ -0.62
SH3TC1-223	ENST00000513495	C10orf91	Q5T1B1	145 aa		11.16	□□□□□ -0.62
SH3TC1-223	ENST00000513495	DMRTA1	Q5VZB9	504 aa		11.16	□□□□□ -0.62
SH3TC1-223	ENST00000513495	WDR73	Q6P4I2	378 aa		11.16	□□□□□ -0.62
SH3TC1-223	ENST00000513495	ZNF575	Q86XF7	245 aa		11.16	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SLC7A5P1	Q8MH63	180 aa		11.16	□□□□□ -0.62
SH3TC1-223	ENST00000513495	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	TRGV4	A0A0C4DH28	118 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	HIGD1C	A8MV81	97 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	C3orf84	H3BNL1	204 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	RHOD	O00212	210 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	IGHV3-53	P01767	116 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	APOC3	P02656	99 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SMIM17	P0DL12	118 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SST	P61278	116 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SLA	Q13239	276 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	RNF212	Q495C1	297 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SMIM15	Q7Z3B0	74 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	SVBP	Q8N300	66 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	PGLYRP4	Q96LB8	373 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	AP1S3	Q96PC3	154 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	CTDSP1	Q9GZU7	261 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	NAT8B	Q9UHF3	227 aa		11.15	□□□□□ -0.62
SH3TC1-223	ENST00000513495	MUC4	Q99102	2169 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	MUC21	A0A0G2JKD1	596 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	MUC21	A0A140T8X8	626 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	RS1	O15537	224 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	NXPH4	O95158	308 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	SNAPIN	O95295	136 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	TRGC1	P0CF51	173 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	FOXA3	P55318	350 aa	Predicted RBP	11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	RHEB	Q15382	184 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	TWIST1	Q15672	202 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	GTSF1	Q8WW33	167 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	FAM210B	Q96KR6	192 aa		11.14	□□□□□ -0.63
SH3TC1-223	ENST00000513495	SMIM27	A0A1W2PRY6	76 aa		11.13	□□□□□ -0.63
SH3TC1-223	ENST00000513495	CFAP126	Q5VTH2	177 aa		11.13	□□□□□ -0.63
SH3TC1-223	ENST00000513495	ZFAND6	Q6FIF0	208 aa		11.13	□□□□□ -0.63
SH3TC1-223	ENST00000513495	ZFP2	Q6ZN57	461 aa		11.13	□□□□□ -0.63
SH3TC1-223	ENST00000513495	IGHV4-4	A0A075B6R2	117 aa		11.12	□□□□□ -0.63
SH3TC1-223	ENST00000513495		A0A1B0GUT8	65 aa		11.12	□□□□□ -0.63
SH3TC1-223	ENST00000513495	NTF3	P20783	257 aa		11.12	□□□□□ -0.63
SH3TC1-223	ENST00000513495	RIG	Q13278	110 aa		11.12	□□□□□ -0.63
SH3TC1-223	ENST00000513495	FAM74A4	Q5TZK3	123 aa		11.12	□□□□□ -0.63
SH3TC1-223	ENST00000513495	CLRN3	Q8NCR9	226 aa		11.12	□□□□□ -0.63
SH3TC1-223	ENST00000513495	ZNF479	Q96JC4	524 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms