RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FBLL1A6NHQ2 334 aaKnown RBP4.85□□□□□ -1.63
USP46-208ENST00000512656 UPK1BO75841 260 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 MPC2O95563 127 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 INAFM2P0DMQ5 153 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 PPT1P50897 306 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 GOLT1AQ6ZVE7 132 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 ASB13Q8WXK3 278 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 PRADC1Q9BSG0 188 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 NDFIP1Q9BT67 221 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 SMIM3Q9BZL3 60 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 SH3BGRL3Q9H299 93 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 TREM1Q9NP99 234 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 RPH3ALQ9UNE2 315 aa4.85□□□□□ -1.63
USP46-208ENST00000512656 K7EQM0 130 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 GNRH2O43555 120 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 GATA1P15976 413 aaPredicted RBP4.84□□□□□ -1.63
USP46-208ENST00000512656 XGP55808 180 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 H2BFSP57053 126 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 DEFA1P59665 94 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 DEFA3P59666 94 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 Q5VSD8 79 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 MARVELD1Q9BSK0 173 aa4.84□□□□□ -1.63
USP46-208ENST00000512656 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
USP46-208ENST00000512656 IGLV5-52A0A0A0MRZ9 124 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 TRBV6-4A0A1B0GX49 114 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 TAAR5O14804 337 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 TYMSP04818 313 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 FUSP35637 526 aaKnown RBP eCLIP4.83□□□□□ -1.64
USP46-208ENST00000512656 KRTAP10-1P60331 282 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 RHOHQ15669 191 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 ZNF876PQ49A33 203 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 ZFP69Q49AA0 526 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 OR10J3Q5JRS4 329 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 OR10G9Q8NGN4 311 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 OR10G7Q8NGN6 311 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 TMEM70Q9BUB7 260 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
USP46-208ENST00000512656 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 FAT1Q14517 4588 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 TRAV8-1A0A0A6YYK1 113 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 LOC100131303A0A0U1RQF7 123 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
USP46-208ENST00000512656 IBA57-AS1B1ANH7 110 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 F6UZH7 168 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 RS1O15537 224 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 MBP02144 154 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 CDC34P49427 236 aaPredicted RBP4.82□□□□□ -1.64
USP46-208ENST00000512656 RAB2AP61019 212 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 LELP1Q5T871 98 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 SLC25A29Q8N8R3 303 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 C5orf17Q8NAS9 161 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 PTH2Q96A98 100 aa4.82□□□□□ -1.64
USP46-208ENST00000512656 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
USP46-208ENST00000512656 HMGB3O15347 200 aaKnown RBP4.81□□□□□ -1.64
USP46-208ENST00000512656 EIF3GO75821 320 aaKnown RBP eCLIP4.81□□□□□ -1.64
USP46-208ENST00000512656 GCGP01275 180 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 TCRAP04437 139 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 STAG3L2P0CL84 134 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 STAG3L3P0CL85 134 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 ARL14EPLP0DKL9 152 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 MGST1P10620 155 aaKnown RBP4.81□□□□□ -1.64
USP46-208ENST00000512656 GNG5P63218 68 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 IFITM3Q01628 133 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 LAGE3Q14657 143 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 SMUG1Q53HV7 270 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 SAPCD1Q5SSQ6 148 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 OR2G3Q8NGZ4 309 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 ATP6V0E2Q8NHE4 81 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 TVP23CQ96ET8 276 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 GTSF1LQ9H1H1 148 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 Q9HAA7 133 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 WFDC1Q9HC57 220 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 TMEM167BQ9NRX6 74 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 PSG8Q9UQ74 426 aa4.81□□□□□ -1.64
USP46-208ENST00000512656 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 A8MWV9 139 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 CXorf1O96002 111 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 C1QBP02746 253 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
USP46-208ENST00000512656 S100A4P26447 101 aaKnown RBP4.8□□□□□ -1.64
USP46-208ENST00000512656 GCHFRP30047 84 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 SERF2P84101 59 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 FLI1Q01543 452 aaPredicted RBP4.8□□□□□ -1.64
USP46-208ENST00000512656 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 ZFP2Q6ZN57 461 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 Q8N814 137 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 SUN5Q8TC36 379 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 RAB24Q969Q5 203 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 C9orf85Q96MD7 179 aa4.8□□□□□ -1.64
USP46-208ENST00000512656 PSMG3Q9BT73 122 aaPredicted RBP4.8□□□□□ -1.64
USP46-208ENST00000512656 A0A087WWC5 75 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 IGHV3-73A0A0B4J1V6 119 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
USP46-208ENST00000512656 SEC11BP0C7V7 166 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms