RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 LGALS1P09382 135 aaKnown RBP7.19□□□□□ -1.26
MSH3-203ENST00000512531 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 G0S2P27469 103 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 TSPOP30536 169 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 LEPP41159 167 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 LINC00310P59036 64 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 SPATA45Q537H7 98 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 SPANXN1Q5VSR9 72 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 FAM19A2Q8N3H0 131 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 PEMTQ9UBM1 199 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 PAM16Q9Y3D7 125 aa7.19□□□□□ -1.26
MSH3-203ENST00000512531 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 D6R8Y8 96 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 DUSP14O95147 198 aaKnown RBP7.18□□□□□ -1.26
MSH3-203ENST00000512531 HLA-DMBP28068 263 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 ASIPP42127 132 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 KRTAP10-3P60369 221 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 ERCC8Q13216 396 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 KPRPQ5T749 579 aaPredicted RBP7.18□□□□□ -1.26
MSH3-203ENST00000512531 IGFL4Q6B9Z1 124 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 EBLN2Q6P2I7 272 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 ODF3Q96PU9 254 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 U3KQK5 164 aa7.18□□□□□ -1.26
MSH3-203ENST00000512531 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 IGHV1-24A0A0C4DH33 117 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 CRXO43186 299 aaPredicted RBP7.17□□□□□ -1.26
MSH3-203ENST00000512531 HBDP02042 147 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 CSN3P07498 182 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 UNQ9165/PRO28630Q6UXU0 137 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 DPF1Q92782 380 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 MRAP2Q96G30 205 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 KLK15Q9H2R5 256 aa7.17□□□□□ -1.26
MSH3-203ENST00000512531 IGHV4-4A0A075B6R2 117 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 LINC01549A6NIU2 74 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 SYS1-DBNDD2H3BUS1 97 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 K7EMI3 77 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
MSH3-203ENST00000512531 HNRNPA3P51991 378 aaKnown RBP7.16□□□□□ -1.26
MSH3-203ENST00000512531 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
MSH3-203ENST00000512531 Q6ZSV7 163 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 AMN1Q8IY45 258 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 ST20Q9HBF5 79 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 PHLDA3Q9Y5J5 127 aa7.16□□□□□ -1.26
MSH3-203ENST00000512531 TMEM213A2RRL7 107 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 SOCS3O14543 225 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 SNAI2O43623 268 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 TRBV12-3P01733 135 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 BEAN1Q3B7T3 259 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 SPATA12Q7Z6I5 190 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 C2orf88Q9BSF0 95 aa7.15□□□□□ -1.26
MSH3-203ENST00000512531 TRAV2A0A0B4J234 112 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 LOC389332A0A1B0GUA5 103 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 OR4C46A6NHA9 309 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 C9orf118A6NHY6 69 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 GCSHP23434 173 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 HIST2H2BDQ6DRA6 164 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 AP1S3Q96PC3 154 aa7.14□□□□□ -1.27
MSH3-203ENST00000512531 NOTCH3Q9UM47 2321 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 A0A1W2PRX2 142 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 C2orf70A6NJV1 201 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 LINC01619G3V211 115 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 ATP5LO75964 103 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 IFI27P40305 119 aaPredicted RBP7.13□□□□□ -1.27
MSH3-203ENST00000512531 SSTP61278 116 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 Q6ZN92 141 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 APRG1Q8IVJ8 170 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 Q8N2B8 174 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 DPH3P1Q9H4G8 78 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 ZNF702PQ9H963 129 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 SIGLEC8Q9NYZ4 499 aa7.13□□□□□ -1.27
MSH3-203ENST00000512531 TIMM8BQ9Y5J9 83 aaPredicted RBP7.13□□□□□ -1.27
MSH3-203ENST00000512531 IGKV3-7A0A075B6H7 116 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 H3BVH4 76 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 RNASE4P34096 147 aaKnown RBP7.12□□□□□ -1.27
MSH3-203ENST00000512531 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 Q8N8P6 123 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 OR1N2Q8NGR9 330 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 MYOZ3Q8TDC0 251 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 DYNLRB2Q8TF09 96 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 C4orf3Q8WVX3 66 aa7.12□□□□□ -1.27
MSH3-203ENST00000512531 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
MSH3-203ENST00000512531 TRGV11A0A075B6L2 103 aa7.11□□□□□ -1.27
MSH3-203ENST00000512531 C7orf71A4D174 169 aa7.11□□□□□ -1.27
MSH3-203ENST00000512531 M0R381 172 aa7.11□□□□□ -1.27
MSH3-203ENST00000512531 TCAPO15273 167 aa7.11□□□□□ -1.27
MSH3-203ENST00000512531 FCER1GP30273 86 aa7.11□□□□□ -1.27
MSH3-203ENST00000512531 HOXD3P31249 432 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms