RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 GTSF1Q8WW33 167 aa10.09□□□□□ -0.79
PCDHA4-202ENST00000512229 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
PCDHA4-202ENST00000512229 C1orf159Q96HA4 380 aa10.09□□□□□ -0.79
PCDHA4-202ENST00000512229 SEC11AP67812 179 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 TP53TG1Q9Y2A0 90 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 H3BUT2 72 aa10.08□□□□□ -0.8
PCDHA4-202ENST00000512229 SPRY2O43597 315 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 IGHG4P01861 327 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 OR13C6PQ8NH95 151 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 A0A087X0K7 114 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 PAX2Q02962 417 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 A0A1W2PPR1 153 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 AZU1P20160 251 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 KLF5Q13887 457 aaPredicted RBP10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 WFDC11Q8NEX6 87 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 SPXQ9BT56 116 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 MYO15AQ9UKN7 3530 aa10.07□□□□□ -0.8
PCDHA4-202ENST00000512229 TRBV6-1A0A0K0K1D8 114 aa10.06□□□□□ -0.8
PCDHA4-202ENST00000512229 C20orf78Q9BR46 151 aa10.06□□□□□ -0.8
PCDHA4-202ENST00000512229 SPCS1Q9Y6A9 102 aa10.06□□□□□ -0.8
PCDHA4-202ENST00000512229 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
PCDHA4-202ENST00000512229 DEFB1P60022 68 aa10.06□□□□□ -0.8
PCDHA4-202ENST00000512229 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
PCDHA4-202ENST00000512229 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 I3L3M4 83 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 NEGR1Q7Z3B1 354 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 Q8N6K4 173 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 NUPR1O60356 82 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 IGLV2-8P01709 118 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 SRSF2Q01130 221 aaKnown RBP10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 CFHR3Q02985 330 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 APRG1Q8IVJ8 170 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE7O76087 117 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 CFAP161Q6P656 301 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 ADAMTS20P59510 1910 aa10.05□□□□□ -0.8
PCDHA4-202ENST00000512229 IGLC3P0DOY3 106 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 TRAV13-1A0A0B4J241 112 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE12JA6NER3 117 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 IGLL1P15814 213 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 GATA1P15976 413 aaPredicted RBP10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE1Q13065 139 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE4Q13068 117 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE5Q13069 117 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 LGALS9BQ3B8N2 356 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 GAGE13Q4V321 117 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 LGALS9CQ6DKI2 356 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 TMEM86BQ8N661 226 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 ACANP16112 2415 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 MALP21145 153 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 MLST8Q9BVC4 326 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 M0R2P5 195 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 Q6YL49 198 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 ZNRF2Q8NHG8 242 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 ZNF747Q9BV97 191 aa10.04□□□□□ -0.8
PCDHA4-202ENST00000512229 DEFB121Q5J5C9 76 aa10.03□□□□□ -0.8
PCDHA4-202ENST00000512229 LINC00322Q6ZN03 302 aaPredicted RBP10.03□□□□□ -0.8
PCDHA4-202ENST00000512229 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
PCDHA4-202ENST00000512229 MRPS16Q9Y3D3 137 aaKnown RBP10.03□□□□□ -0.8
PCDHA4-202ENST00000512229 REV3LO60673 3130 aa10.03□□□□□ -0.8
PCDHA4-202ENST00000512229 PMVKQ15126 192 aa10.03□□□□□ -0.8
PCDHA4-202ENST00000512229 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.8
PCDHA4-202ENST00000512229 TMEM61Q8N0U2 210 aa10.02□□□□□ -0.8
PCDHA4-202ENST00000512229 TMEM141Q96I45 108 aa10.02□□□□□ -0.8
PCDHA4-202ENST00000512229 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
PCDHA4-202ENST00000512229 MORN3Q6PF18 240 aaPredicted RBP10.02□□□□□ -0.81
PCDHA4-202ENST00000512229 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
PCDHA4-202ENST00000512229 DNAL4O96015 105 aa10.01□□□□□ -0.81
PCDHA4-202ENST00000512229 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
PCDHA4-202ENST00000512229 FREM2Q5SZK8 3169 aa10.01□□□□□ -0.81
PCDHA4-202ENST00000512229 F8VRH5 84 aa10.01□□□□□ -0.81
PCDHA4-202ENST00000512229 HIST2H2BCQ6DN03 193 aa10.01□□□□□ -0.81
PCDHA4-202ENST00000512229 ZFAND3Q9H8U3 227 aa10.01□□□□□ -0.81
PCDHA4-202ENST00000512229 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 CTRLP40313 264 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 CHAC1Q9BUX1 264 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 U3KQE9 123 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 CRPP02741 224 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
PCDHA4-202ENST00000512229 ZNF479Q96JC4 524 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 ESDP10768 282 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 APOC4P55056 127 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 RASL10AQ92737 203 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
PCDHA4-202ENST00000512229 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
PCDHA4-202ENST00000512229 ZNF80P51504 273 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms