RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 AKAP9Q99996 3911 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 M0R378 163 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGLV1-44P01699 117 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 IL3RAP26951 378 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 TAS2R45P59539 299 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 ODF3L2Q3SX64 289 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 CYP2G1PQ6ZSU1 146 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 BAGE3Q86Y29 109 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 BAGE2Q86Y30 109 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 PCP2Q8IVA1 136 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR5H2Q8NGV7 314 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR10AC1Q8NH08 325 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 DYNLRB1Q9NP97 96 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 CTSZQ9UBR2 303 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZFHX3Q15911 3703 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGKV1-27A0A075B6S5 117 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 C3orf85A0A1B0GTC6 90 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 A0A1W2PPM0 123 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 TMEM250H0YL14 139 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 K7EQD1 137 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 SOCS1O15524 211 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 SLC25A5P05141 298 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 C3orf79P0CE67 100 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 MPV17P39210 176 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF138P52744 262 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 ABHD14BQ96IU4 210 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 F11RQ9Y624 299 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 PRRC2AP48634 2157 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 DSCAMO60469 2012 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRAV12-2A0A075B6T6 113 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 LYNX1G3V0Z9 82 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 H3BUT2 72 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 M0R135 149 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 LYNX1P0DP58 116 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGLL1P15814 213 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF80P51504 273 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 CCL8P80075 99 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 CDK5R1Q15078 307 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 RSPO1Q2MKA7 263 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 MAPK1IP1LQ8NDC0 245 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 SCGB1C1Q8TD33 95 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 KLF14Q8TD94 323 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 TMEM158Q8WZ71 300 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 PMCHL2Q9BQD1 86 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 FAM103A1Q9BTL3 118 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 C16orf95Q9H693 158 aa3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 KLK5Q9Y337 293 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-208ENST00000511955 J3QLW9 94 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 M0R2P5 195 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 SYNGR2O43760 224 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 SCGB1C2P0DMR2 95 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 CRYGAP11844 174 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 SNRPD3P62318 126 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 C1orf100Q5SVJ3 147 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 C18orf32Q8TCD1 76 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 LSM10Q969L4 123 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 SPTSSAQ969W0 71 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 RAB37Q96AX2 223 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 TOMM6Q96B49 74 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 C20orf78Q9BR46 151 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 NF1P21359 2839 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 TRAV1-1A0A0B4J248 108 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 FSTL3O95633 263 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 RPL23P62829 140 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 DEFB113Q30KQ7 82 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 LCA10Q71F78 164 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF525Q8N782 197 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 OR8A1Q8NGG7 326 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 H1FXQ92522 213 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 CSPG4Q6UVK1 2322 aa3.77□□□□□ -1.81
TRAPPC11-208ENST00000511955 F8P00451 2351 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV3OR16-12A0A075B7B8 117 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 H3BT86 120 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 K7ERJ3 54 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF324O75467 553 aaPredicted RBP3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGHV4-39P01824 125 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 HLA-DRB4P13762 266 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 HBBP68871 147 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 QRFPP83859 136 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 LGALS9BQ3B8N2 356 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 BPIFA4PQ86YQ2 179 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 ZNF645Q8N7E2 425 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 NUP37Q8NFH4 326 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 SMIM7Q9BQ49 75 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 HLA-DRB4X5D2U9 266 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 SONP18583 2426 aaKnown RBP3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 IGLL5B9A064 214 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 PIN1P1O15428 100 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 PITX3O75364 302 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 CXCL5P42830 114 aa3.76□□□□□ -1.81
TRAPPC11-208ENST00000511955 SPRNQ5BIV9 151 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms