RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MRPL18Q9H0U6 180 aaKnown RBP6.67□□□□□ -1.34
NR1I3-228ENST00000511676 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
NR1I3-228ENST00000511676 TRAV12-3A0A0B4J271 114 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
NR1I3-228ENST00000511676 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 APCSP02743 223 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 CD7P09564 240 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
NR1I3-228ENST00000511676 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 GZMBP10144 247 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-228ENST00000511676 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
NR1I3-228ENST00000511676 CASC10Q5T4H9 136 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 SMIM15Q7Z3B0 74 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 TMEM191AQ9H0A3 160 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 LAMTOR2Q9Y2Q5 125 aa6.66□□□□□ -1.34
NR1I3-228ENST00000511676 TMSB15BA0A087X1C1 80 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 IGKV3-20P01619 116 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 PPBPP02775 128 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 S100A6P06703 90 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 FABP9Q0Z7S8 132 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 ZFP82Q8N141 532 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 RCHY1Q96PM5 261 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 SPXQ9BT56 116 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 TPPP3Q9BW30 176 aa6.65□□□□□ -1.34
NR1I3-228ENST00000511676 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
NR1I3-228ENST00000511676 GRIFINA4D1Z8 144 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 A8MZ25 164 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 RNASE3P12724 160 aaKnown RBP6.64□□□□□ -1.35
NR1I3-228ENST00000511676 NTF3P20783 257 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 CAMPP49913 170 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 RAB4BP61018 213 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 ZNF415Q09FC8 603 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 Q0VG73 95 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 TWIST1Q15672 202 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 AP1S3Q96PC3 154 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 SPATA25Q9BR10 227 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 NAGKQ9UJ70 344 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 GOLT1BQ9Y3E0 138 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 PHLDA3Q9Y5J5 127 aa6.64□□□□□ -1.35
NR1I3-228ENST00000511676 TRAV12-2A0A075B6T6 113 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 LOC102724200A0A096LPH7 203 aaPredicted RBP6.63□□□□□ -1.35
NR1I3-228ENST00000511676 C5orf52A6NGY3 159 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 H3BVH4 76 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 J3KRW8 73 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 UBE2CO00762 179 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 SPINK4O60575 86 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 APOC4P55056 127 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 SLAQ13239 276 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 ZNF124Q15973 351 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 MUC21Q5SSG8 566 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 NBEAL2Q6ZNJ1 2754 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 Q8N1Y9 231 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 OR10AG1Q8NH19 301 aa6.63□□□□□ -1.35
NR1I3-228ENST00000511676 CBY3A6NI87 242 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 PPP1R17O96001 155 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
NR1I3-228ENST00000511676 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 ESDP10768 282 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 RBMY1FQ15415 496 aaKnown RBP6.62□□□□□ -1.35
NR1I3-228ENST00000511676 ZNF705AQ6ZN79 300 aaPredicted RBP6.62□□□□□ -1.35
NR1I3-228ENST00000511676 POM121L12Q8N7R1 296 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 MRAP2Q96G30 205 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 PACRGQ96M98 296 aaPredicted RBP6.62□□□□□ -1.35
NR1I3-228ENST00000511676 ALKBH7Q9BT30 221 aaPredicted RBP6.62□□□□□ -1.35
NR1I3-228ENST00000511676 CSTL1Q9H114 145 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 GSN-AS1Q9NRJ2 163 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 SORL1Q92673 2214 aa6.62□□□□□ -1.35
NR1I3-228ENST00000511676 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 M0R381 172 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 GNRH2O43555 120 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 GIG44P09565 113 aaPredicted RBP6.61□□□□□ -1.35
NR1I3-228ENST00000511676 FRMD6-AS1P0C7T7 363 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 Q6ZQT7 251 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 ORMDL3Q8N138 153 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 C1orf158Q8N1D5 194 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 DEFB125Q8N687 156 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 TMEM263Q8WUH6 116 aaKnown RBP6.61□□□□□ -1.35
NR1I3-228ENST00000511676 LINC01587Q99440 93 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 TMEM208Q9BTX3 173 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms